Ctenopharyngodon idella (grass carp): 127512256
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Entry
127512256 CDS
T08802
Name
(RefSeq) spectrin family protein isoform X1
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04517
IgSF CAM signaling
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127512256
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127512256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127512256
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127512256
Intermediate filaments
Intermediate filament-binding proteins
127512256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
PH_17
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
127512256
NCBI-ProteinID:
XP_051748955
LinkDB
All DBs
Position
5:23393349..23471679
Genome browser
AA seq
2408 aa
AA seq
DB search
MEGEDRAAVEFPAVTMSTISPTDFDSVEIQQQYNDINNRWDIAAETEWDNENSSARLFER
SRIKALADEREAVQKKTFTKWVNSHLGRVTCRIGDLYTDLRDGRMLIRLLEVLSSEQLPK
PTKGRMRIHCLENVDKALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDI
SVETEDNKEKKSAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRSDLIDF
DNLKRSNAHYNLQNAFNVAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKA
LAVEGKRIGKVLDYAIEADQLIEKYETLASELLQWIEQTIVTLNDRQLANSLSAVQNQLQ
AFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKA
EHERELALRNELIRQEKLEMLAARFDRKAAMRETWLSENQRLVSQDNFGVDLGAVEAATR
KHEAIETDIQAYGERVAAVEAVARELEAERYHEVRRILARRDNVLRLWEYLKELLAARRE
RLMAHRDLQRLLQEMSYIMDWMEEMKSRLQSQDSGKHLHDVEDLLQKHTLVEADISAQAE
RVKAVQAAAKRFTSNEQSYKPCDPALVEEKVDLLGRAYGELGQLAADRRARLDDSRRLWQ
FLWELGEEAAWIREQEQILSGGDNGKDLSSALHFLSKHEAFRDEMAARYGPLGNSIAGGE
ALVREGHFGAPEVTERIKDVKAQWSHLEEASQLREQRLKESVAFHQFQTDANDMEAWIME
TLRQVSSQELGHDEFSTQTLARKQREVEEEIQSHRPLIDSLHEQASTLPEAYAQSPQVEG
RLPAIEQRYEELEGLSSSWRQALDGALALYRMFSEANACQLWVGEKEQWLHNMEIPTKLE
DLEVVQQRFETLEPEMNTLGARISDVNQVAQQLLGSDNRSKEQIDQTQNQLNNRWSDFQS
LANQRKQALESALNIQNYHLECNEIKSWMKEKTKVIESTQSLGNDLAGVMALQRKLTGME
RDLEAIQGKLDDLRSEAEKLASEHPEQEEEIKGRLAEIQEVWEELRATMKRREESLGEAS
KLQGFLRDLDDFQAWLSRTQTTVASEDTPTSLAEAERLLGQHEAIKNEVDNYREDYEKMR
ATGAEVTQGQTDAQYMFLAQRLQALDTGWHELRRMWESRHCVLAQAFDFQTLLRDAKQAE
GFLNSQEYVLSHTEMPSSLQGAVEAIKKHEDFLTTMEASEEKINGVVESGRRLVSDGNTY
ADKIQEKTDSIQERHQKNKQAANELLAKLKDNRELQHFLQDGQELTLWINEKMLTAQDMS
YDEARNLHSKWQKHQAFMAELASNKDWLDKIDKEGQVLVKEKPEHEQTVSETLSGLQKQW
EELENTTQAKAQCLFDANRAELFTQSCSALDSWLQNISSQLQSDDFGKDLTSVNILLKKH
QMLEHQMEVREKEVQSLQSQALALAQEDSGTVEVDGQQRRVTDSFAQLQDPLKQRRQHLL
ASKEAHQFNRDLEDEILWVKERMPLATSTDHGKDLPSVQLLIKKNQTLQKEIQGHQPRID
DIQAHGRNMSPGKESEMDKERKAALDGRLAELRELWALMISETEKRNMRLAEANRAQQFY
TDAAEAEAWMGEQELHMMSEEKAKDEQSALVMVKKHQILEQALEDYAQTIHQLANSSRLM
VNSEHPESERITLRQAQVDKLYAGLKDLAEERRGKLQERLRLTQLKREVDDLEQWIAERE
VVAGSHELGQDYEHVTMLRDKFREFARDTSTIGQERVDAVNAQADELIESGHPENASVAE
WKDGLNEAWADLLELIDTRTQMLAASYELHRFHQDAREALGLIKEKKETLAGAELGRDLN
TVQHLLRQHTAYEHDVQALSGQVTQVQDDAARLQKAYAGEKADDIHRHERAVTEAWEGLQ
SATQARRLLLLDTVEKFRFLNMVRDLMLWMEGINLQIQSHDSPRDVSSAGLVIANHQDIK
SEIDTRADSFTACSEMGRTLINNNHYASDEIQEKLDQLQAKRTEINQKWQEKMDHLQIVL
EVLQFSRDASMAESWLAGQEPLVRAAELGSNVDEVESLIKRHEAFEKLAAGWEDRFTQLE
KLTTLEEQEIQRRREEEERARRPPTPPPVEEVVPSEINDSAARTSLDQTTLNQSVSVNGV
YSDQETSQSLSVSVSEFKKAEPKPESKPQSNPVSKPVPKPHKAQERGSETESVNGPGRDS
GLDSASRQDPSATLPGRGGAEAATEAMEGILCRKQEMESHNKKAATRSWQNVYCVLRKGS
MGFYKDNKSASNGIPYHGEVPISLDEAVCEVAHDYKKRKHVFKLRLGDGKEFLFQAKDEA
EMSSWIRAIQSSLLSTERSPGGPRGLSRAMTMPPMSPSSGEGGGVTMRNKDGKERGGEKR
FSFFGKKK
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagaggacagggcagctgttgagtttccagctgtgaccatgagcaccatctca
ccgactgatttcgacagcgtcgagatccagcagcagtacaacgacatcaacaaccgctgg
gacatcgcagctgaaacagagtgggataatgagaatagttctgcacgtctgttcgaacgt
tcccgcatcaaagctctcgcagatgagagagaggcagtgcagaagaagacattcactaaa
tgggtgaattctcacctgggccgtgtgacctgcagaattggtgacctctacactgacctc
cgcgatggacgcatgcttatccgactgctggaggttctctccagtgaacaactgccaaag
cccaccaagggccgtatgcgcatccactgtctggagaacgttgacaaggctctgcagttc
ctaaaggaacaaaaggttcatctggagaatatgggttctcacgacatagtcgacggaaac
caccgtctcacacttggactcatctggactataatccttcgcttccagatccaagacatt
agcgttgagacggaggacaacaaggagaagaaatctgccaaagacgctctgctgctgtgg
tgtcagatgaagactgcagggtacccgaatgtcaatgtccacaacttcaccaccagctgg
agagatggtctagcgttcaatgccatagtgcacaaacacaggtcagacttgattgacttt
gataatcttaagcgctctaatgcccactataacctgcagaatgcctttaatgtggctgag
aaggagctgggtcttaccaagctactggatcctgaggatgtgaatgtcgatcagcctgat
gaaaagtccatcatcacatatgtggccacatactaccactacttcagcaagatgaaggcg
ctcgctgtagagggcaagaggatcggcaaggtgctggactatgctattgaggcagatcag
ctgatagagaaatacgagactctggcctcagagctgctgcagtggattgaacaaaccatt
gttacccttaatgaccgtcaactcgctaactcactcagtgcggttcagaaccagctacag
gccttcaatacctatcgcactgtagagaaaccacccaagttcactgaaaagggaaatttg
gaagtcttgctcttcaccattcagagtaaaatgagagcaaacaaccaaaaagtctacatg
ccaagagagggaaaactcatctctgacatcaacaaggcgtgggagaggctggagaaagca
gaacacgagagagagttggcactcagaaacgagctgattcgtcaggagaagctggagatg
ttggccgcacgctttgaccgcaaagcagccatgagagaaacctggctcagcgaaaaccag
cggctagtgtcacaggacaattttggtgttgacctgggcgctgtggaggcagccactcgc
aaacacgaggccatcgagaccgacatccaggcgtatggtgagcgcgtagcagctgtagag
gctgttgctcgagaactggaagcggagagatatcatgaagtgcgccgcatactggcacgg
agggataacgtgctcagactgtgggagtatctgaaggaattacttgcggcacggcgcgag
aggctaatggcacacagagacctgcagcgcctcttacaggagatgagctacatcatggac
tggatggaagagatgaagagtcgcctgcagtcccaggacagtggaaaacaccttcatgat
gtggaggacttgctgcagaaacacacactagtggaagctgatatatccgcacaggcggag
agagtcaaagctgtgcaggctgctgcgaagagatttacttcaaatgaacagagttataag
ccgtgtgaccctgcgctggttgaagagaaggtggacctgctgggccgagcatatggagaa
ttgggccagttggcagcagatcgacgagctcgactggatgactcgcgcaggctgtggcag
ttcctgtgggagctgggagaggaggctgcctggattcgagagcaggagcagatcctgtcc
ggaggagataatggaaaggacctgagctctgcccttcacttcctgtctaaacatgaggcc
ttcagggacgagatggcagcccggtacggccccctggggaatagcattgctggtggagaa
gccctggtaagggaaggccactttggagcacctgaggtgacagagcggatcaaggacgtg
aaagcacagtggtcacacctggaggaggcctcacagttgcgtgagcagaggctgaaagag
tctgtagctttccatcagttccagacagacgccaatgacatggaagcctggataatggag
acactaagacaggtgtctagtcaagaactgggccatgatgagttttctacacagactctg
gccagaaagcagagagaggtggaagaggagattcaaagtcaccgaccactcatcgactca
ctacatgaacaggcctcaaccctgcctgaagcgtacgcacagtccccacaggtggagggg
cgtctcccagcgatagagcagcgctatgaagagttagagggtttgtcgtcgtcatggcga
caggccttagatggcgcacttgcgttgtatcgcatgtttagtgaagctaatgcatgccag
ctgtgggttggagaaaaagaacagtggctgcacaacatggagattcccaccaaactagag
gacctggaggtggtccagcagaggtttgaaactctggagccagagatgaacacactgggc
gctcgcatttctgatgtcaatcaagtggcacaacagctgcttggatcagacaatcgcagc
aaagagcagattgaccagacccaaaaccaactcaataacaggtggtctgatttccagagt
ctggccaaccagcgtaaacaagctctagaatcagcactgaatatccagaactatcatcta
gagtgtaatgagatcaagagctggatgaaggagaagaccaaggtcattgagtccacgcag
agccttggaaacgacctggctggagtcatggccctgcagcgcaagctcactggtatggag
agagacctggaggctatacagggtaagttggatgacctgcgttctgaggccgagaagttg
gcatctgagcatcctgagcaggaggaggagatcaagggtcgactggctgaaatccaagag
gtgtgggaggagcttcgagccaccatgaagcggcgtgaggagtctttgggcgaagcctca
aagcttcagggcttcctcagagatctcgatgacttccaggcctggctttctcgtacacag
accaccgtggcgtccgaggacacgcccacctctctggccgaagcagagcgtctgttggga
cagcatgaggccataaagaatgaagtagataattacagggaagattatgagaagatgaga
gctactggagctgaggtaactcagggacagactgatgcccagtacatgttcttagcccag
cgactgcaagcgttggacaccggctggcatgagttgaggagaatgtgggagagccgccac
tgtgtccttgcccaggcctttgatttccaaaccttgctgcgagatgcaaaacaggcagag
ggcttcctcaatagccaggaatatgttctgtcacacacggagatgccctccagcctgcaa
ggggctgtggaggccatcaagaaacatgaggatttccttactaccatggaggccagtgaa
gaaaagatcaatggtgtggtcgagtctggacggagacttgtatctgacggcaacacctat
gcagacaagatccaagagaagacagactccattcaggagagacaccagaagaacaaacaa
gctgccaatgagctgctggccaaactgaaggataatagagagctgcagcacttccttcag
gatggacaagagctgacattgtggataaatgagaagatgttgacggctcaggacatgtcc
tatgatgaggccagaaacctccacagcaagtggcagaagcaccaggccttcatggctgag
ctggcctctaataaagactggctggacaagattgacaaggagggtcaagtgttggtgaag
gagaagcctgagcacgagcagacagtatcagagactctgagtggcctgcagaagcagtgg
gaggagttggagaacaccactcaagccaaagctcagtgtctgttcgacgccaaccgagct
gagcttttcacgcagagctgttcagcgctagactcctggctccagaacatctcctctcaa
ctccagagcgatgactttggaaaagatctcaccagtgtcaacatcctgctcaagaaacac
cagatgctggagcatcagatggaggtgcgtgagaaagaggtccagtctctgcagtcacag
gctctggccttggcccaagaggattctgggacagtggaggtggatggtcagcagagaagg
gtgacagacagttttgctcagctgcaggaccctctaaaacagcggaggcagcatcttctt
gcttcaaaagaggctcatcagttcaacagagaccttgaggatgagattttatgggtgaag
gaaaggatgcccctcgccacttccacagaccacggtaaagatctgcccagcgttcagctg
ctcatcaaaaagaatcagactctgcagaaggagattcagggtcatcagcctcgtatagat
gacatacaggctcacggtagaaacatgtcccctgggaaggagtcagagatggacaaggag
aggaaagctgctcttgatggacgtctggcagagctgagggaattgtgggcccttatgatt
tctgagacggagaagagaaacatgaggttagcagaagctaaccgagcacagcagttttac
acagatgctgcggaggctgaggcctggatgggagaacaagagcttcatatgatgtcagag
gagaaggcgaaggatgagcagagtgctctggtaatggtgaagaaacaccagattctggag
caggctctagaggactacgctcagaccatccaccagctggccaacagcagcagactcatg
gtgaacagcgaacacccagagagtgaaagaatcactctgaggcaggcccaggtggataaa
ctgtatgcagggttgaaggatctggcagaagaaaggagaggcaaactgcaggagagactg
agactgacccagctgaagagagaggtggatgatttagagcagtggatcgctgagagagag
gtcgtcgcagggtctcatgaacttggacaagactacgaacatgtgactatgttgcgtgat
aagttccgggaatttgcgagggacactagcacaattggccaggagcgtgtggatgcagtg
aacgctcaggcagatgaacttatagagtcaggtcatccagaaaacgccagcgtagctgag
tggaaggatgggctcaatgaggcctgggccgacctgttggagctcatcgacacacgcaca
cagatgctggccgcctcgtacgagctgcaccgcttccatcaggatgcccgggaagctctt
gggctcataaaggagaagaaggagacactagctggagctgaactcggacgggacctgaac
actgtccaacacttgcttagacagcatacggcctatgagcatgatgtgcaggcactcagt
ggacaggtcacacaggtgcaggacgatgctgcacgtctgcagaaagcatacgccggagag
aaagctgatgatatccatcgccatgagcgtgcagtcacagaggcctgggaggggcttcag
tctgccactcaagccaggcggctgctcctgctggacacagtggagaagttcagattttta
aacatggtcagagaccttatgctgtggatggagggaatcaacttacagattcagtcacat
gacagtccgagggacgtctcctcagctggtctggtcatcgccaaccatcaggacattaaa
tctgagatagacactagagcagacagcttcactgcttgcagtgaaatgggacggaccctc
atcaataacaaccactatgcttcagatgagattcaagagaaattggatcagcttcaggcc
aaacgcacagaaattaatcagaagtggcaagagaaaatggaccacttacagattgttctg
gaggtattacagtttagtagggatgcgtctatggccgaatcgtggcttgctggacaggag
ccgctggtcagggcagcagaattgggctctaacgtagacgaggttgagagtcttatcaaa
cgccacgaagcctttgaaaaactggcagcaggctgggaagatcgtttcacacagctagag
aagctcaccacgctggaggaacaggaaattcaaaggagaagagaagaggaagagagggcc
agacgaccacccacacctccccctgtggaggaagtagtaccgtctgagattaatgattct
gctgcaaggacgagtctggaccagactacattgaaccagtcagtatctgtcaatggtgtc
tacagtgaccaggaaacatcacagtcattatcggtctctgtatctgaattcaagaaagcc
gaacctaaaccagagagtaaacctcagtctaacccagtttctaagcctgtgcctaaaccc
cacaaggcacaggagcgtggatcagaaacggaatcagttaacggtccgggccgtgacagt
ggtctggactcagcatcacggcaagacccttcagcaacactgccagggcgaggaggagca
gaggcggccacagaagccatggagggcatcctttgcaggaaacaggaaatggaatcacac
aacaaaaaagcagccaccagatcgtggcagaatgtatattgcgttttacgtaaaggaagt
atgggtttctataaggacaacaagagtgcctctaatggaatcccctaccatggagaagtt
cccatcagcctcgatgaggctgtctgtgaggtagcccatgactacaagaagaggaaacat
gtatttaaacttaggcttggggatggaaaagagttcttgttccaagcgaaggatgaggct
gagatgagttcatggattcgagcaatccagtcatccctgctgtccaccgagcgttcgccg
ggtggcccacgaggtctgagtcgggcgatgacaatgccgccaatgtctcccagctcgggc
gagggtggaggcgtgaccatgcgcaacaaagacggcaaagagagaggcggagagaagcgc
ttcagtttctttggcaaaaagaaataa
DBGET
integrated database retrieval system
