Ctenopharyngodon idella (grass carp): 127514727
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Entry
127514727 CDS
T08802
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127514727
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
127514727
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
Atx10homo_assoc
HEAT_2
Motif
Other DBs
NCBI-GeneID:
127514727
NCBI-ProteinID:
XP_051753794
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Position
6:31860151..31874300
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AA seq
736 aa
AA seq
DB search
MMPEPLKSALSLGDVEDTSLALPSDRDLRSAQQRVLEQVHTIKRSKSKYSSKSVSGLASP
TSPESDSVFYDFKFSPSTSLSGPSFNRGGTMTNGNMQRQNTVRKSTNSRSSSGQRVASSS
SRLDRSLYSPTGTFPAQPRTSNQLYSYKATRSAPDLGFQATTNGSASTTQRSQSGRQTFR
MEKTYIQPNQPLGNGTLGRMTNSNQVGTFRTVNRRPSSLQSNGESRLSVIRTGQAKDISG
MNTEKLMADMTMREAVDYLFSPEETYQQYGAAYIQHSTFTDDKAKQEVLTLKGIPPLLSL
LSSPNIQVQETAAAALRNVVFKNQANKEEVQRCGGIVPVVQVLSDTNPETQKHLTGLLWN
LSSADNLKPDLLRTALPALTEKVIEPFSASTDDNANTSLAPEVFYNATACLRNLSASKLA
NRQAMRNCKGLIDSLMRYTENCVNAGTPDNQSLENCVCILHNLTYQLETEMPSLFTKINT
LASYARNRSSSSDAGPIGCFSSQSQKLQQESGFDYPVMEDNNPKGAGWLFHSKALQMYLS
LLSSSERDATLEASCGALQNLTANDGIVSNVLSHTIVQKLNGLKYISPLLQSSNTALQNS
AVALLGNLSRSTRTNKVMARQTLPQLVGFLNSGLTKGDSSPEYDSTMATALHSAHALLKA
DPEIGKSLLNNSLINSLNNMSLNLNLPKSSTAAGVLLHSLWSEKNIQSFLKKQGMNKKSF
VNDITSAAFKSLQVVD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgaacctttaaaatccgctctgtcattaggagatgtggaggacacgtctctc
gcgctcccgtccgaccgcgacctgagatccgcgcagcagcgagttctggagcaggttcac
accatcaagaggagcaagtccaaatacagcagcaaaagtgtgtccggactcgcttccccc
accagccccgaaagtgacagtgtgttttacgacttcaagttttctcccagcacgtctctc
agcggaccctcgttcaacagaggaggaaccatgacaaatgggaatatgcaaaggcaaaac
actgttcgcaagtccaccaactcccgcagctccagcggtcaacgggtggccagtagctcc
agcaggttagatcggtccttgtactcccctaccggcaccttccctgcccagccgcggacc
agtaaccaactgtacagctataaagccacccgtagtgctccggacctgggcttccaagcc
accacgaacggcagcgccagcactactcaacgcagccaaagcggccgacagacctttcgg
atggagaagacctacattcagcctaaccagcctctcggtaacggtacactcggcagaatg
actaacagcaatcaggtcggcacttttcggaccgtcaacagacgcccgtcttccctgcag
tccaatggagagtccaggttgtctgtgatcaggactggacaagccaaggatatttctggg
atgaacacagagaagcttatggccgatatgacgatgcgagaggcggtcgactatctgttc
agcccggaagaaacctaccagcagtatggcgctgcttacatccagcacagcaccttcacc
gatgacaaggccaagcaagaggtgctgaccctgaagggcattcctccgctgctcagcctg
ttgagcagccccaacattcaggtccaggagacggcggccgctgccctgcgaaacgtggtc
ttcaaaaaccaggccaataaagaggaagtgcagcgctgcggaggaatcgtaccggttgtg
caggtgctcagcgacacaaaccctgagacacagaaacacctgacaggtctcctgtggaac
ctctcctccgcggacaaccttaagcccgatctgctccgcaccgctctgcccgcgctcacc
gagaaagtcatagagccgttttcagccagcacagatgacaacgccaacacaagcctggca
ccagaggtcttctacaatgccacggcatgcctacgcaacctaagcgcctccaaactggca
aaccgacaagccatgcgcaactgcaaaggccttatcgactcgctcatgcgctacacagag
aactgcgttaatgcagggactccagataaccagtctttggagaactgcgtgtgtattttg
cacaacctcacctaccagctggagaccgagatgccgtctctcttcactaaaataaacaca
ctggccagttacgctcgcaaccgctccagttcatcagacgctggtccgatcggctgcttc
agctcccagagccaaaaactgcagcaggagagcggctttgactatcctgtgatggaggac
aacaatcctaaaggtgccggctggctcttccactctaaagccctgcagatgtacctcagt
ctgctgagctccagcgaaagagacgccacacttgaggccagctgtggagcgctgcagaac
ctcacggccaatgacggcattgtatcaaatgtgttgagtcacacaatcgttcagaagctt
aacggtcttaagtacatcagtccattgttgcagtcatccaatactgcgctacagaacagc
gcagtcgctctcctcgggaatctgtccagatctacacgtacaaacaaagtcatggcccgc
cagactctaccgcagctagtcggtttcctgaactcagggctcacgaagggcgattcctcg
cccgaatacgacagcaccatggcaacagctcttcacagcgcacacgccctgctgaaggcc
gatcctgagatcggcaagagtctgctgaacaacagcttgatcaactccctcaacaacatg
agtctcaatctgaatctgccaaagtccagcactgcggcaggagttcttcttcacagcctg
tggtcggaaaagaatattcagagttttcttaaaaagcaaggcatgaataagaagtctttt
gtgaatgacataacgtcggcagctttcaaatctcttcaggtggttgactga
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