Ctenopharyngodon idella (grass carp): 127516485
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Entry
127516485 CDS
T08802
Name
(RefSeq) sodium-dependent noradrenaline transporter
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127516485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127516485
Transporters [BR:
cide02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127516485
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127516485
NCBI-ProteinID:
XP_051757113
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Position
7
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AA seq
621 aa
AA seq
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MNIQVLPEHKLSSVAPLKQFNVEKKEVELILVKEQNGVQYTNSSVVASPSSHGCAEEVER
ETWGKKLDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLIPYILFLFIAGMPLFYMELAL
GQYNREGAATVWKICPVFKGVGYTVIVIALYVGFYYNVIIAWSLYYLYASLTSELPWLRC
NNLWNSPNCTDPKLINGTFLGNGTSYAKYKNTPAAEFYERGVLHIHESKGIDDLGLPRWE
LTICLVVVVFILYFSLWKGVKSSGKVVYITATMPYIVLLVLLIRGITLPGAMNGIRAYLH
IDLKKLNNPQVWIDAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDAILTSTINCITSFF
SGFAIFSVLGYMADQHGVNIKDVATEGAGLVFIIYPEAISALPGSTFFAIVFFIMLLTLG
IDSSMGGMEAVITGLSDDFKILKRNRKLFTFATAFGTFLVALLCVTNGGIYVLTLLDKYA
AGTSILFGVLIEAIGVSWFYGVDRFSEDIERMMGFKPGIYWRLCWKFVSPVFLLFVVIAS
IVTSGDLRYDEYTFPYWSNFVGWSIALSSMLFVPIYAIYKFLSMPGSFKERIAYCITPEH
EHHMVAEGNVRQFKLRHWLSI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccaagtcctgcccgagcacaaactgtcctcggtggccccgttgaaacagttt
aacgtagagaaaaaggaagtggagctgatcctggtgaaggagcagaatggggtccagtac
acgaactcctctgtcgtggcctctccgagctcccatggctgcgctgaggaggtggagagg
gagacctggggaaagaaactggactttctactctctgtcataggctttgctgtggacctg
gccaatgtctggaggttcccctacctgtgttacaaaaatggaggaggtgcctttttgatc
ccatatattctgttcctgtttattgctgggatgcctctgttttacatggaacttgccctg
ggccagtacaacagagagggagcagctactgtttggaagatctgccctgtatttaaaggc
gtgggctacactgtgatcgtcatagcattgtatgtgggcttttactacaacgtcatcata
gcctggtctctgtattacttatatgcttcattgacaagtgagctgccctggctcagatgt
aataacctgtggaacagccccaactgcacagatccaaagctcatcaatggcaccttcttg
ggtaatggaacctcctatgccaagtacaagaacacaccggctgcagagttctacgaacga
ggggtgctgcacattcatgagagtaaaggcatcgatgacctgggtcttcctcgctgggag
ctcaccatctgccttgttgtggtcgtcttcatcctctacttcagcctatggaagggagtc
aaatcctctggaaaggtggtgtatattacagctactatgccctacatagtgttgttggtg
ttgctgattcgaggcatcactctccctggtgcaatgaatggaattagggcatatctccac
attgacctaaagaagctcaataaccctcaagtatggattgatgcagctactcagatattc
tattctctaggagctgggtttggagtccttattgccttcgctagctacaataaatttgac
aataactgctacagggatgctattctgaccagcacaataaactgcataaccagtttcttc
tcagggtttgccatcttctcagtactggggtatatggctgatcaacatggtgtcaacata
aaggatgtggccactgagggagctggactggtgtttattatctacccagaagcaatttca
gctctacctggatctacattcttcgcgatagtctttttcattatgcttctgacacttgga
attgacagctctatgggcggcatggaggcagtaatcactgggctctcagatgacttcaaa
atcctcaagaggaatagaaagttatttacgtttgctacagcatttgggacattcctagta
gcccttctgtgcgtcacaaatggagggatctatgtgttgaccttgttggacaagtatgct
gcagggacatccattctatttggggtgctgattgaggccattggagtatcttggttctat
ggcgtggacagatttagtgaggacattgaacgcatgatgggcttcaaaccagggatctac
tggaggctctgctggaagtttgtcagtccagtgttcttattgtttgtggtgatcgccagt
attgttacttccggcgacctgagatatgatgaatatactttcccttactggtcaaatttt
gtgggctggtccatagccttgtcctccatgctgtttgtacccatctatgccatctacaaa
ttcctcagtatgccaggaagcttcaaagagaggatagcgtactgcattactccagaacat
gaacatcacatggtggccgagggtaatgtcagacagttcaagctcagacattggttatcc
atctga
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