Ctenopharyngodon idella (grass carp): 127517130
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Entry
127517130 CDS
T08802
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
KO
K06752
MHC class II antigen
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04145
Phagosome
cide04514
Cell adhesion molecules
cide04672
Intestinal immune network for IgA production
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127517130
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127517130
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
127517130
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127517130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127517130
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127517130
Exosomal proteins of epithelial cells
127517130
Exosomal proteins of breast milk
127517130
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Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
Motif
Other DBs
NCBI-GeneID:
127517130
NCBI-ProteinID:
XP_051758316
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Position
8:complement(11579127..11580991)
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AA seq
253 aa
AA seq
DB search
MSLPKVLGCHLILMLSSFTGAANGYYEYMWSRCIYSNRDFSDMVYIDNYSFNKDVDVQFN
STVGYYVGYTEPGVHYAQLWNNDTIGLQQERAEVERVCKPNAELYYTAHLIGKAVPPKVK
LSSVTQAGGRHPAMLMCSAYRFYPRWITVSWMRDGKVVKSDVTSTEEMPNGDWYYQIHSH
LEYTPKSGEKISCAVDHAGLTKPIIIDWDPSLPESERNKIAIGASGLVLGIIIAAAGLIY
YKKKSSGRILVPS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgccgaaggtcttgggttgtcatctcatattgatgctgtcttcattcactgga
gcagctaatggatactacgagtatatgtggagtagatgcatctacagtaaccgtgatttc
agtgacatggtgtacattgataactattccttcaataaagatgtggatgtacagttcaac
agcactgtggggtattatgtggggtatactgaacctggagtacattatgcacaattatgg
aacaatgataccatcggtctgcagcaagagagagctgaggtggagagagtctgcaaacct
aatgctgaattatattacaccgctcatcttattggcaaagcagtgccaccaaaggtcaag
ctcagttcagtgactcaggctggtggaagacacccagctatgttgatgtgcagcgcttac
cgcttctacccacgctggatcacagtgtcctggatgagagatggtaaagttgtgaagtct
gatgtgacttcaactgaggagatgcctaacggagactggtactaccagattcactcccac
ctagaatacactcccaaatctggagagaagatctcctgtgcggtggatcacgccggctta
actaaacccatcatcatagactgggatccatctcttcctgagtctgagaggaataaaata
gccattggagcctctggcctggtgctgggaatcatcatagcagctgctggactcatttac
tacaagaagaaatcatcagggaggatcctggtaccatcttaa
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