KEGG   Ctenopharyngodon idella (grass carp): 127517132
Entry
127517132         CDS       T08802                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04145  Phagosome
cide04514  Cell adhesion molecules
cide04672  Intestinal immune network for IgA production
cide05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cide00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127517132
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127517132
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    127517132
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127517132
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cide04147]
    127517132
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127517132
  Exosomal proteins of epithelial cells
   127517132
  Exosomal proteins of breast milk
   127517132
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 127517132
NCBI-ProteinID: XP_051758318
LinkDB
Position
8:11688075..11690482
AA seq 252 aa
MSLPKILSCHLILMLSAFTGAANGYYNSVWYRCIHSSRDLSDMVFIVDGIFNKDVLIQFN
STVGKFVGYTDLGVHNAELYNKDPNILNQWRGEKDRYCTHNAKNRQSAIADKTVPPEVKL
TSVTQASGRHPAMLMCSAYNFYPHQIQVSWMRDGKVVKSDVTSTEEMPNGDWYYQIHSHL
EYTPKSGEKISCAVDHAGLTKPIIIDWDPSLPEPERNKIAIGASGLVLGIIIAAAGLIYY
KKKSSGRILVPS
NT seq 759 nt   +upstreamnt  +downstreamnt
atgtcactgccgaagatcttgagttgtcatctcatactgatgctgtctgcattcactgga
gcagcaaatggatactacaattctgtgtggtatagatgcatccacagctcccgtgatctc
agtgacatggtgttcattgttgacggtatcttcaataaggatgtgctcatacagttcaac
agcactgttgggaaatttgtggggtacactgatcttggagtacataatgcagaattatat
aacaaagatcccaacattctgaaccaatggagaggtgaaaaggacagatactgcacacat
aatgctaaaaacagacagtcagctatcgctgataaaacagtgccaccagaggttaagctc
acttcagtgactcaggccagtggcagacatccagctatgttgatgtgcagcgcttacaac
ttctacccacaccagatccaagtttcctggatgagagacggtaaagttgtgaagtctgat
gtgacttcaactgaggagatgcctaatggagactggtactaccagattcactcccaccta
gaatacactcccaaatctggagagaagatctcctgtgcggtggatcacgccggcttaact
aaacccatcatcatagactgggatccttctcttcctgagcctgagaggaataaaatcgcc
attggagcctctggcctggtgctgggaatcatcatagcagctgctggactcatttactac
aagaagaaatcatcagggaggatcctggtaccatcttaa

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