KEGG   Ctenopharyngodon idella (grass carp): 127517135
Entry
127517135         CDS       T08802                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04145  Phagosome
cide04514  Cell adhesion molecules
cide04672  Intestinal immune network for IgA production
cide05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cide00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127517135
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127517135
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    127517135
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127517135
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cide04147]
    127517135
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127517135
  Exosomal proteins of epithelial cells
   127517135
  Exosomal proteins of breast milk
   127517135
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_3 Ig_2 C2-set_2 ig I-set
Other DBs
NCBI-GeneID: 127517135
NCBI-ProteinID: XP_051758320
LinkDB
Position
8:11842653..11864763
AA seq 245 aa
MFVHLSSIKMELHRTILILTIVLSNGAAFEHEAYVFEACSDTEEEFFIGYDEEEMWHTDF
DQKKGVVTFPEIAGNITFPGVYELSVSEMAICKSNLQIYKIIFKSPPPQLDAPQTSIYPK
DNVQLGILNNLVCHVTGFYPPSVRVLWMKNNVNVTEGMSLSQYRPRTDGTFNIFSTLEFT
PAEGDIYSCMVNHRALQGQPQTKIWEVQVALPSVGPAVFCGMGLTLGLLGVAAGTLFLIK
GNSCN
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtttgttcatctctcatctatcaagatggagctgcacagaaccattctcatccttacc
attgttctctcaaatggtgctgcatttgaacatgaagcttacgtatttgaagcatgctct
gatacagaagaagagtttttcattggatatgatgaagaggagatgtggcacaccgacttt
gatcagaagaaaggagtagtgacattccctgaaattgcaggaaatataacatttcctgga
gtttatgaactcagtgttagtgaaatggcaatatgcaaaagtaacttacaaatttacaaa
atcattttcaagagcccaccaccacaactggatgcacctcagacttccatctatccaaag
gataatgtacagctgggtattctgaacaaccttgtctgtcatgtgactggcttctaccct
ccatctgtcagagtattatggatgaagaataatgttaatgtgacagagggtatgagttta
agtcagtaccgtccgaggacagatggtacatttaacatattctccactcttgagtttaca
cctgctgaaggagacatttacagctgcatggtgaaccacagagccctccagggtcaacct
cagaccaaaatatgggaagttcaagttgccctcccaagtgttggtccagctgtgttctgt
ggaatgggtctgactcttggacttttgggagtcgctgctggaacattgttcctcattaaa
ggaaacagctgcaactga

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