KEGG   Ctenopharyngodon idella (grass carp): 127517867
Entry
127517867         CDS       T08802                                 
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cide03037]
    127517867
Cilium and associated proteins [BR:cide03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   127517867
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 NBCH_WD40 TPR_IF140-IFT172 Beta-prop_WDR19_1st Beta-prop_EML TPR_GEMI5 TPR_IFT80_172 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st WDR90_beta-prop_4th eIF2A TPR_7 Beta-prop_NWD2_C Beta-prop_WDR75_1st TPR_2 TPR_COPA_B Beta-prop_SPT8 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 127517867
NCBI-ProteinID: XP_051759979
LinkDB
Position
8:complement(108064..154393)
AA seq 1187 aa
MRAVPTWIDKVHDRDKVEQCIYDLAFRPDGSQLIVAAGNRVLVYDTADGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVTYNPVTHQLASCSSG
DFGLWSPEQKSVSKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGG
SSSPIWSIAWNPSKDEHNDILAVADWGQKLSFYQLSGKQIGKDRQLNFDPCCVSFFSKGE
YIVMGGSDRQASLYTKDGVRLGTVGEQSSWVWTCRVKPDSNYVVLGCQDGTIAFFQLIFS
TVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYRSRLAIQLPEKILIYE
LYSDDSNDMHYRVKEKICKRFECNLLVVCSQHIILCQEKRLQCLSFTAVKEKEWLMESLI
RYIKVIGGPAGREGLLVGLKNGAILKIFVDNPFAITLLKQNTSVRCLDMSTSRSKLAVVD
EHNTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGSGYLNIKASNFPVHQQKLQGF
VVGYNGSKIFCLHVYSMAAVEVPQSAPMYQYLERRMFQEAYQIACLGVTDNDWRDLATEA
LEGLDFHTAKKAFIRVRDLRYLELISSIEERKRRGENDNQLFLADVYAYQGKFHEAARLY
RRSGQDSRALSMYTDLRMFEYAKDFLGSADPKDTKLLMKKQADWAKNSKEPRAAADMYLT
AGEHMKAIEIIGEHGWMDMLIDLARKLDKAEREPLSRCAVFFKKFNHHGYAAEIYNKMGD
LKALVQLHVDTTHWDEAFSLVEKHSQFRDDVYVPYAQWLAEHDRFEEAQKAFHKAGRQAE
AVRVLEQLTHNAVVESRFNDASYYYWMLSMQCLDIARDNTEKKEEMLKKFHSFQHLAELY
HVYHSVHRYMSEPFSSNMPEILFNISRFLFHNLTRDVPMGISKVDTLYALAKQSKVLGAY
KVARHAFEKLQGLKIPSRYQESMELSCLTVRSKPYRDSEDLIPMCYRCSTNNPLLNNQGN
SCINCRQPFIFSASSYEVLPLVEFYLEEDISDEEAVSLIDLEVPRVERSGSWQEMGGGES
QCLKLDDGTEDPEDDPFTAKLSFEQGGREFVPVVVSRAVLRSMSRRDVLIKRWPKPLSWQ
YYRSLLPDVSITMCPSCFQMFHSEDYELLVLQHNCCPYCRRPIDEPS
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgagggctgttcccacatggatagataaagtacacgaccgggataaggttgaacaatgt
atttatgatctcgccttcagaccagatggatctcagctcatagtagcggctggaaatcga
gttctggtgtacgacacggccgacgggacgctcatacagccgctgaagggacacaaagac
actgtctactgcgtggcttacgctaaagatgggaaacgctttgcatccggttcagcagat
aaaagcatcatcatctggacctcaaaactggaggggatcctcaaatacactcacaatgac
tcgatccagtgtgtgacgtacaaccccgtcacacaccagctggcgtcatgttcctcagga
gacttcggtctgtggtctccagagcagaagtctgtctccaaacacaaagtcagcagtaag
atcacctgctgtgggtggactaatgacggccagtacttggctctgggaatgatgaacggt
gtggtgagcatcagaaacaagaacggagaagagaaggtgaagatcgagcgtccgggcggc
tcctcatcgcccatctggtccatcgcctggaacccgtccaaggatgaacacaatgatatc
ttggcagtggctgattgggggcagaagctgtctttctaccagctcagtgggaaacagatt
gggaaggaccggcagctgaactttgacccctgctgcgtgagcttcttctcgaagggcgag
tacattgtgatgggcggctcagacagacaggcttcgctctacactaaagacggggttcgg
ctcggcaccgttggcgagcagagctcctgggtttggacctgccgcgtcaagccagactcg
aattatgtggttttaggctgtcaggacggcaccatcgcattcttccagctcatcttcagc
acggttcatggcttatacaaggaccgctatgcctacagggacagtatgaccgacgtcatc
gtgcagcacctcatcaccgagcagaaagtgcgaataaaatgccgtgagttggtgaagaag
atcgccatctaccgcagccgactggccattcagcttcctgagaagatcctcatctacgag
ctttactccgacgactccaacgacatgcattaccgcgtcaaagagaagatctgcaaacgc
tttgagtgcaacctgctggtcgtctgctcacaacatatcattctctgtcaggaaaagagg
ctgcagtgtttgtccttcacggccgtcaaagagaaagagtggctgatggagtctctcatt
cgctacatcaaagtgatcggcggcccggctggacgagaggggcttctggtgggactgaag
aacggagctatcctgaagatcttcgtggacaacccgttcgccatcacgctgctgaagcag
aacacgtctgtgcgctgtctggacatgagcacgtcacgcagcaaactggcagtggtggac
gaacacaacacgtgcctggtgtacgacattcacaccaaagagctgctcttccaggagccc
aatgcgaacagcgtggcgtggaacacgcagtgtgaagacatgctgtgtttctctggcagt
ggatatctgaacatcaaggccagtaacttcccagtgcaccagcagaaactgcagggcttc
gtagtgggttacaatggatccaagatcttctgccttcacgtctactctatggctgcagtg
gaggtgcctcagtcggctccgatgtatcagtacctggagcgccgcatgtttcaggaggcc
tatcagatcgcctgtctgggagtgacggataatgactggagggatctggccactgaggct
ctggagggactcgatttccacaccgccaagaaggcgttcatcagggttcgagatctgcgc
tatctggagctcatcagcagcattgaagagaggaagaggaggggtgagaatgataaccag
ctcttcctcgcagacgtttacgcgtatcagggcaagttccatgaggccgccagactctac
cggagaagcgggcaggacagccgtgcactcagcatgtacaccgacctgcgcatgtttgag
tacgccaaggacttcctcggctcagcagatcccaaggacactaaactgctgatgaagaag
caggcggactgggcgaagaacagtaaagagcctcgagcggctgcagacatgtacttgacg
gcaggagaacacatgaaagccatcgagatcatcggagaacatggctggatggacatgttg
atagatttggctcgtaagctggataaagcagagcgggagccgctgtccagatgtgccgtg
ttttttaagaagttcaatcatcacggttacgctgctgagatttataataaaatgggtgat
ctgaaggcgctggtgcagcttcatgtggacactacacactgggatgaggcgttctctcta
gtcgagaaacactctcagttcagagatgacgtgtatgtgccgtacgcacagtggttggct
gaacacgaccgtttcgaggaggcccagaaagccttccacaaagcggggcgtcaggcggag
gccgtgcgagtgctggagcagcttacccataatgccgtggtggagagcaggttcaatgac
gcctcgtactactactggatgctgtccatgcagtgcctcgacatcgccagagataacaca
gagaagaaggaggagatgctgaagaagtttcacagtttccagcacttggctgagctgtat
cacgtctatcattctgtccatcgatacatgtcggagccctttagttccaacatgccagaa
attctcttcaacatctcccggtttctcttccacaacctgaccagagatgttcccatgggc
atctctaaagtagatactctgtatgctctggcaaagcagagtaaagttctgggagcatat
aaagtagcgcgacacgccttcgagaaactgcagggcctgaagatcccgtcccgctatcag
gagagcatggagctcagctgcctgacagtccgctccaaaccctaccgtgacagcgaggat
ttgatcccgatgtgttaccgctgctccaccaacaaccctttgctgaataaccagggcaac
tcctgcatcaactgcagacagccgttcatattttctgcctcctcttatgaggttcttccg
ctggtagagttttatctggaggaggatatctcggatgaggaggccgtgtctctgattgac
ctggaagtgcctcgcgtggagcgaagcggcagctggcaggagatgggcggaggagaatct
cagtgtctgaagctggatgatgggactgaagacccagaggacgacccctttacagccaaa
ctcagctttgagcagggtggccgggagtttgtgccggtggtcgtgagtcgggcggtgttg
aggtccatgtctagacgggatgttctgatcaagcgctggcccaaacctctcagctggcag
tactaccgatctctgctgcccgacgtcagcatcaccatgtgtccgtcctgctttcagatg
tttcacagtgaggactacgagctgttggttcttcagcacaactgctgtccgtactgccgc
agacccatcgacgagcccagctag

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