Ctenopharyngodon idella (grass carp): 127518946
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Entry
127518946 CDS
T08802
Name
(RefSeq) zinc finger protein GLI2a isoform X1
KO
K16798
zinc finger protein GLI2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127518946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127518946
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
127518946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
127518946
NCBI-ProteinID:
XP_051762180
LinkDB
All DBs
Position
9:complement(15770281..15851999)
Genome browser
AA seq
1440 aa
AA seq
DB search
METTSPTTTEKKECKGSGLDGSSFSDLPKKPSPTTASRAPHLFSTFHTPIPIDMRHHEGR
YHYEPHPLHPMHGPHGLAGSPVISDISLIRLSPHAAATGESPFNPPHPYVNPHMEHYLRS
VHSSPTLSMISAARGLSPADAVTHEHLKERSLFGLPPPPPGANPSEYYHLIASHRSPYGD
LLMQTGAAAAHLPDYMSPVDMSRFPSPRLTPRVSRKRALSISPVSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGAISPSFTFPHPITPVAYHQLLSQQRGLNAFGHTPP
LLQPSPSLSTRQQTLVAAAALTNNNSADTNTESSQNAGGDPAVSSTVNPMIFKRSKVKTE
ADGPHPISPGSQDHMELREELDKDECKQEPEAVYETNCHWEGCSKEYDTQDQLVHHINND
HIHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLK
THLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSL
RKHVKTVHGPEAHVTKKQRGDAPPKPHPPKGNGENEAHTKHVRGRTDGLGEANSTTRGVE
DCQHVKSIKTENTVMYQSSPGGQSSCSSEPSPLGSATNNDSGVEMAMHSGGSLGDLSALD
DTPVVDSTGSPGTSAGVGLQLRKNRGLLHLEHIKKEKLKTVRDSCSWANASPQVRNTKLP
PIPSIDSLLETSNTGTQMPGPPTQRSGDLSSYEMTMLNQLHERRDSSTSTMSSAYTLSRR
SSGISPCYSSRRSSEASQFGVRNNNVSSADSYDPISTDMSRRSSEASQCGGAGGLPSLLN
LTPAQHYRLKAKYAAATGGAPPTPLPNMDRMSLRTRMALYNDSQESSTHLHHSQGVINSR
RCSDTGYSAPGMMPHEVQANLLRRASDPVRRTTFDPLSLPRVQRFNSISNMNLSRLPALD
RRAFNLQSNTCSDGSLHRHPFSQRPPSISENVLMENMASEGGDQQEDDIVLPDDMVQYLR
SQNGSSHQDLGISVNGGHALDFHGNMTSQQQQIYGQWRIGMASNTGSHVEPICSHPEQTA
DTQDMNKNNMPVQWNEVSSGSVDTTARLPKQQQLRGNLAVVQQKQNFGPYQGFGTNQQIV
PMNQNLASMQQGYPQRTIQRMNSVQQYRQSVTNPCQNLSEQVNPQSVYRQDLNFNSSQHL
TCNSMGPPNGRAVQNQQMQNYRSNFTHMNNMNNANQQNYVPLTAGQNAGRGQIQPRPPSE
PKPLNRQHSGSGMVQQNGCSLSNANSSEASPKRPGDFGQHGNGNGTVYYSGEIHMLDPIV
DYGSPMSPCTNQAPVASVSTMASPGVNQVTSTVDSTQTLEHTQIDFDAILDDGDHSSLMS
GTLSPGLLQSLSQNSSRLTTPRNSVTLASIPAGIGNMAIGDMSSMLTALAEESKFLNMMA
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacaagtcccaccaccacagaaaagaaggaatgcaagggatcaggcctggat
ggcagtagtttctcagaccttcccaaaaagccctcaccgaccacagcatctcgagctcct
catttattctcaaccttccacacgccgattccgatcgacatgcgacaccatgaggggagg
taccattacgagccacaccctctgcaccccatgcatggacctcatggattagctggcagt
ccagttatctctgatatctctctcattcgactgtcgcctcacgctgcagctaccggagaa
tcccccttcaacccaccacacccgtatgtcaacccacacatggagcactacctgcgatca
gtccatagcagccccactctctccatgatctctgcagcacgaggactgagccccgctgac
gcagtgacccatgaacacctgaaggagcggagcttgtttggcctgccccctcctccacct
ggggccaatccctcagagtactatcacctcatcgccagtcaccgcagtccttatggagac
ctgctcatgcagacgggggccgcagctgctcaccttcctgactacatgagcccagtggac
atgtcccgtttccccagtcccagactgacgccgagggtgagcaggaagcgagcgctgtcc
atctctcctgtctcggatgccagcatcgacctgcagaccatgatccgcacctcgcccaat
tctctggtggcctacatcaataactcccgctccagctcggctgccagcagctcttacggc
cacctctctgttggggccatcagtccatccttcacattcccacatcctatcacaccagtt
gcataccaccagctgttgtcccaacagagaggtctaaatgcatttggacacactcccccc
cttctgcagccttctccttccctcagtaccaggcagcagacgctggtggcagctgctgct
ctgaccaacaacaacagcgccgacaccaacacagagtccagccagaatgctggtggagat
cctgctgtcagcagcactgtcaaccctatgatcttcaagaggtcaaaggtgaagactgaa
gcagatggaccccaccccatctcacctggttctcaggatcacatggagttacgggaggaa
cttgataaagatgaatgcaagcaagaacctgaggccgtgtatgagaccaactgccactgg
gagggatgttccaaagagtacgacacccaggaccagctagttcatcatatcaataacgac
cacatccatggagagaagaaggagtttgtgtgccgatgggaggagtgctcacgagaacag
aagccttttaaggcccagtacatgcttgtggttcacatgcgtcgacacactggggagaag
ccccataagtgcacatttgaaggttgctcgaaagcttactctcgactggaaaacctcaaa
actcacttgaggtcccacacaggggagaaaccttatgtatgcgagcatgagggttgcaac
aaggcgttttccaatgcttcagaccgagccaagcaccagaaccgcacacactcaaatgag
aaaccatatgtgtgcaagatcccaggttgcacaaaacgctatacagaccccagttctctc
aggaaacatgtgaagaccgttcatggtccagaagcacatgtcactaagaagcagcgtggt
gatgcaccacctaaacctcacccccctaaagggaatggagaaaatgaggcacacacaaag
catgtaaggggaagaacagacgggttaggggaggccaacagcaccacccgaggagtggag
gattgccaacatgtcaagtctatcaagacggaaaacacagtgatgtatcagtccagccct
ggtggtcagtcatcatgtagcagtgagccatcgccacttggcagtgccaccaacaatgac
agtggagtagagatggccatgcacagtggaggcagtttgggggacctgagtgctttagat
gacacgcctgtagtagattctaccggttctccaggtacttctgcaggagtaggtcttcag
ctgcgtaaaaacaggggactactacatcttgagcacatcaagaaggaaaaactaaaaact
gtaagagactcctgctcctgggcaaatgcttcacctcaagtccgaaataccaagctgcct
ccaataccctctattgactcattgctggagacttcaaatacgggcactcagatgcctgga
cctccaacgcaacgttcaggagatttgtcttcgtatgagatgacaatgctaaatcagctg
catgagcgcagagacagctccaccagcacaatgagctcagcatatacgctaagtcgtcgg
tcctctggtatttcaccctgctactccagtcgtcgctctagcgaggcttcgcaatttgga
gtccgcaacaacaatgtcagctcagcagattcctatgaccccatctccacagatatgtcg
cggcgctccagtgaagctagccaatgcggcggtgcaggtggactaccaagtttactaaat
ctcacgccggcacaacactaccgtctcaaggcgaaatacgctgcagccacagggggtgca
ccaccgacacctctacccaacatggatcgcatgagtcttagaactagaatggccctgtac
aatgactcgcaagaaagttcaacacatttgcaccattcccaaggtgtaatcaactcaaga
cgctgcagtgacaccggctacagtgcccctggcatgatgcctcatgaagttcaggctaac
ctcctgcgacgagcaagtgatcctgttcgtcgtacaactttcgacccgctctccttgcca
agggttcagcgtttcaacagcatcagcaacatgaacttatcgcgtctgcctgcgttagat
cgacgtgctttcaacttgcagagcaacacttgttctgatggcagcttgcaccgtcatccc
ttcagccaaaggccacctagtatttcagagaatgttttaatggagaatatggccagtgaa
ggaggtgatcagcaagaggatgatatagtacttccggatgacatggtacagtacctcagg
tcccagaatggtagctcacatcaggacctagggatttctgtcaatggcggtcatgcacta
gacttccatggtaatatgacctcccaacaacaacagatctacgggcaatggcgaattggc
atggcaagcaacactggaagccatgtagagcctatttgctcacatccagagcaaacggct
gatactcaagacatgaacaagaacaacatgcctgtgcaatggaacgaggtcagttctggt
tctgtagatacaactgcaaggcttccaaagcagcaacaactccgagggaacttggcagtg
gttcagcagaagcagaattttggaccttaccaaggctttggcactaatcaacagatagta
ccaatgaaccagaatctggctagcatgcaacagggttatccacaaaggaccatccagagg
atgaactctgtccagcagtatcggcagtctgttactaatccgtgtcagaatctcagcgag
caagtaaaccctcagtcggtatatcggcaggacctcaatttcaactccagtcaacaccta
acatgtaacagcatgggtccacccaatgggagagcggtgcaaaaccaacagatgcagaat
tacagatcaaactttacacacatgaataatatgaataacgccaaccagcaaaattacgtt
ccccttactgccggtcaaaatgcaggcagaggacaaatacagcccagacctccatccgag
cccaaacctttgaataggcaacactcagggtcaggtatggttcagcagaatggttgctcc
ctgtccaacgccaactcctcagaagctagcccaaagagaccaggtgactttggtcaacac
ggcaatgggaatggcactgtgtactattcaggagagatccatatgttggaccccatcgtg
gattatggttctcccatgtccccgtgtacaaaccaagcccctgttgcttcagtgtctaca
atggcttctcctggggttaatcaggtcaccagcacagtggactccactcaaacccttgag
cacactcaaatagacttcgatgccattttggatgatggagaccattcgagcctaatgtcc
ggcacattaagtccgggtcttctgcagagtctttcgcagaattcctcacggctcaccacc
ccgcgtaactctgttactttagcttcgataccggcaggtattggcaacatggccattggt
gacatgagctcaatgttaacggcccttgcagaggaaagcaaattcttaaacatgatggca
tga
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integrated database retrieval system
