Ctenopharyngodon idella (grass carp): 127520083
Help
Entry
127520083 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127520083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127520083
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127520083
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127520083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
zf-C3HC4_2
HlyD_2
MRFAP1
LAMB1
Motif
Other DBs
NCBI-GeneID:
127520083
NCBI-ProteinID:
XP_051763827
LinkDB
All DBs
Position
10:complement(39874015..39900934)
Genome browser
AA seq
962 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLTKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVEKNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPP
LQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYIT
QLESAQSSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLCPTTSSGRDSRQGKSSVLEE
GSQAASVGTKEDEDEEKTQHDDSNELSDGDLEVDCLTGDEDVNPLDGSSTSGSSTATSNT
EENDIDEETMSGENDVEYSGNLDLEEGELPDDVAGATGDSGACARGSRRGAGASSASLLE
IDPVILIQLLDLKDRNHVESLWGMQPRPPTSLLQSQAAAVPSRKERERRPQAVRRSAPDS
GVLIRLKAQMAEVRSKMSDVKGQLEARGGAGRVSSQGASNHEQGPSMDSEMGPSRKPSEL
LFKAPISSRHSRSGVKKAGSPKQESVGALGGLSLRRGVDAGEKELRGAGRESPTEPALCP
REGPSSLDGSLKARSVQSSPPSLGSSSSSSDKPSGSKHEELLYGASASGLFSITALNEAA
APATKQRRTPAIGPGLLTDSSLNCDQESADEIHQSLLSLAEPSSSSSSRPDEGLLSQKQP
HHVLPSMSSDSELDCDTENENEDEVVALEAGDCAFDTRTLPCPGEQLIPDDLSFVSGETT
ER
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcagagtgttgagagtattgcggaagttttccgatgcttcatttgcatggaa
aagctgcgcgatgcccgtctatgccctcattgttccaaactctgctgtttcagctgcata
cggcgatggctgactgaacagagagctcaatgtccccactgtcgagctccgcttcagctg
agggaactggtcaactgtcgctgggcagaggaagtgactcaacaactggacacactgcag
ctctgcaacctcacaaaacatgaggagaacgacaaagacaagtgtgagaaccatcatgaa
aagttgagcgtgttctgctggacttgtaagaagtgcatctgtcaccagtgcgctctgtgg
ggaggcatgcatggaggtcatacgttcaaacccctggccgagatctacgagcagcatgtg
acgaaggtgaacgaggaggtggctaagctgcggcgccggctaatggagctcattagtctg
gttcaagaagtggagaagaacgtcgaggcggtgcgtggtgcgaaggatgaaagggtgagg
gaaatccggaatgctgtagaaatgatgattgctcggctcgataatcagctcaagaacaaa
ctcatcacgctcatgggacagaagacctctctgacacaggaaacagaactgctggagtct
ctgctgcaggaagtggaacatcagctgcgttcgtgcagtaagagcgagctgatctctaag
agtccagagatcctgctcatgttccagcaggttcacaggaaaccaatgcagtcttttgtc
accactcctgtcccaccagacttcaccagtgagctggtccctgcctatgactccagcact
tttgttttggcaaacttcagtactctgcggcagagagccgaccccgtctacagccccccg
ctccagatatcaggcctgtgctggaggttgaaggtttatccggatggcaatggagttgtt
cggggaaactatctctctgtttttctggagttgtctgcagggcttcctgagacgtccaaa
tatgaatacagggtggagatggtccatcaggcctccagtgaccccactaaaaacatcatt
cgagagtttgcatcggactttgaggtgggcgagtgctgggggtataacaggttcttcagg
ttggaccttctcgccagtgaaggatacttgaatatgcagactgacactcttgtgctcagg
tatcaagtgcgatcacctacattttttcagaagtgcagagatcagtattggtatataact
cagctggagtcggcccagtccagttacattcagcagatcaacaacctaaaagagaggttg
gccatagaactgttccgtcggcaaaagtcgcggagttcctctccacctgatcggcgtctc
tgccccacgacttcctctgggagagactctcgtcaggggaagagctccgtactggaggaa
gggagtcaggcagcatcagtagggactaaggaagatgaggatgaagagaagacccagcat
gatgactctaatgagttgtctgacggggatctggaggtggactgtctaactggagatgaa
gatgtcaatcctctggatggaagtagcacctctgggagctcaacagccaccagtaacaca
gaggagaatgacattgacgaagagaccatgtctggtgagaatgacgtggagtacagcggg
aatctagaccttgaggaaggtgaattacccgatgatgttgccggggcaacaggagattct
ggtgcctgtgcccggggttcaaggcgtggggcaggtgcaagttcagccagcctcctggag
atcgacccggtcatcctcatccaactcttggacctgaaggaccgcaaccatgtggagtca
ctgtgggggatgcagccccgcccccctacctctctcctccagagccaagctgctgctgtg
ccctctcgtaaagagcgtgagcgtcgtcctcaggcggtgcgtcgttcagccccggactcg
ggggtcctgatcagactgaaggctcagatggcagaagtgcgcagtaagatgtcggacgtg
aaagggcagctggaagctcgtggtggagccggtcgagtctcctctcagggagcctcaaac
catgagcagggcccctccatggactcagagatgggacccagccgcaaacccagtgaactg
ctcttcaaagcgcccatctcatcacgacactctcgcagtggagtgaagaaggctggttct
cctaagcaggagagtgtgggggcgctgggtggactgtccctgcgccggggtgtggatgct
ggggagaaagagctgagaggagcagggcgagagtcccctactgaacctgctctgtgtccc
agagagggaccctcctccttggatggctccctgaaagcacggagtgtgcagagttctcct
ccctcgctgggaagcagctcctcttcctctgataaaccctccggctctaaacacgaggaa
ctgctgtacggagcttcagcttcaggcctgttcagcatcacagctctcaatgaagcggct
gcacccgccaccaaacagcgcaggactccagccattggacctggcctgctgacagacagc
tctctgaactgtgatcaagagagtgccgacgagatccatcagtcactgctgtcactggct
gagccatcgtcctcttcctcctcacgccctgatgaaggtctcctcagtcaaaaacagcct
caccacgtgctgccgagcatgagcagcgacagcgagctggactgtgacacggagaatgag
aatgaggatgaggttgtggctctggaggctggagactgtgcgtttgacaccagaacacta
ccctgcccaggcgagcagctgatccctgatgatctgagctttgtgtccggagagaccaca
gagaggtga
DBGET
integrated database retrieval system
