KEGG   Ctenopharyngodon idella (grass carp): 127520714
Entry
127520714         CDS       T08802                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    127520714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cide03000]
    127520714
   04121 Ubiquitin system [BR:cide04121]
    127520714
   03036 Chromosome and associated proteins [BR:cide03036]
    127520714
Enzymes [BR:cide01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     127520714
Transcription factors [BR:cide03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    127520714
Ubiquitin system [BR:cide04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     127520714
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127520714
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127520714
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like F-box JmjC Cupin_8 LRR_4 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 127520714
NCBI-ProteinID: XP_051765112
LinkDB
Position
10:complement(44399950..44430785)
AA seq 1285 aa
MEACAESGRKLRSICRRMYDENEDLSDVEEITNIRGFSVEDKLESSLYNSEFVQHMEGKD
FTYEYVQREALRTPLIFKAKDGLGIRMPDPEFTVSEIKGLVGSRRAVDVMDVSTQKGSEM
SMAQFVRYYETPEDERDKLFNVISLEFSHTKLENLIKRPTVVDLVDWVDNMWPRHLKQKQ
TEATNVMSEMKYPKVQRYCLMSVKGCFTDFHIDFGGTSVWYHVFKGRKVFWLIPPSTRNL
SLYEDWVLSGKQSDVFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGGNILH
SFNIPMQLTVYEIENRTKVHSKFRYPFFYEMCWYVLERYVNCLTRRSHLSLEFRVHTAEP
KLVTECLVSAPRLDMEENSCETQLEKTEGVTQPSSAVPPYQTLKPPVNDSEDSSKSFPSE
CPKTPSGSPGTEHAGKWTHLTEFELSGLKALVEKLESLPETKRCVPEGIEDPQALLDDVK
VVLKEHADDNPKLAISGSPIVCWPKKSGKPRPLNRPKPKMGSSPSAAPCSAAGGAKLSSS
RGSSSARRRRTRCRKCEACTRKECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTA
VCLVCGEAGKEDTVENEEDKFNLMLMECAICNEILHPDCLKEKDAGGIVNDELPNCWECP
KCNHAGKTGKATKQKRGPGFKYASNLPGSLLKEQRMIRDIKEEPDSNMSTESYTSTVSPV
MKKKTEREDNPTCKSEDALKKRSPKMEDNPLRKKRKLFEKDSDSDCNVRKKKKRSKPDAL
SASNVLGQIKTEREDDEEYDEDNRQELERKPFSFVPSEEDDGDDEREEEEEETMKEKSSR
EENGKILHKTSATEGDQSQGRCTQAGPSSDSGVDAQLRIQRKTKRKPRLPNKELSKELSK
QLNQEIQKTEDRLAHQNGRTVKTEPDSDGEDRKPLNNGSSHLRDWLGPKRELNGSLREQS
PASWIRTTPTPVFRPTPCRSPPKCVQMERHVIRPPPISPPPDRLPLDDGKNHIMRREVWM
AVFSHLAHQDLCVCMRVCKTWNRWCCDKRLWTKIDLNRCKAITPLMLSGIIRRQPVSLDL
SWTNISKKQLSWLINRLPGLRVLLLAGCSWAAVSALCTSSCPLLRTLDVQWVEGLKDNQI
RDLLSPPTDNRPGQLDSRSKLRNVEDLCLAGLDITDASLKLIIKHMPSLSQLDLSYCNHI
TDQSVNILTAAGTTTRDSLTHINLSVCNRVTDLSLTYFKRCGNICHIDLRYCKQVTKEGC
EQFIAEMSVSVQFGLVEEKLLSKLS
NT seq 3858 nt   +upstreamnt  +downstreamnt
atggaggcgtgtgcggaatccggacgcaaactgcggtccatctgcagaagaatgtacgat
gagaacgaggacttgtcagatgtggaggaaatcacaaacatcagaggcttcagcgtggag
gacaaacttgagagcagtttatacaacagtgaatttgttcagcatatggagggaaaagat
tttacctatgaatatgttcaaagagaggcactccgaaccccactcatatttaaagccaaa
gatggactgggaattagaatgccggatccagaatttactgtaagtgaaatcaagggtctg
gttggcagtagacgggctgttgacgtgatggacgtcagtacgcagaagggctcagagatg
agcatggcgcagttcgtccgctactatgagacacccgaggatgagcgtgacaagctgttc
aacgtcatcagcctggagttcagtcacaccaaactggaaaacttgatcaagagacctacg
gtggtggatctggtggactgggtggacaatatgtggccacggcatcttaagcagaaacaa
actgaagccacaaacgtcatgtctgagatgaaatatcccaaagttcagagatactgtctg
atgagtgtaaagggctgtttcactgacttccacattgactttggtggcacatcggtatgg
taccatgtcttcaaaggaaggaaggtcttctggctgattcctccaagcacacgcaatctg
tctctgtatgaggactgggtgctgtcaggcaaacagagcgatgtcttcctgggtgaccgt
gcagacggctgccagcgtgtagagctgaaacagggctacacgttcttcatcccttcaggt
tggatccatgccgtctacactccagaggacaccctggtgtttggcgggaatattctacac
agttttaacattcccatgcagctcactgtctatgaaattgagaacagaacaaaggtgcac
tccaaattccgctaccctttcttctatgagatgtgctggtatgtgctggagaggtatgtg
aactgcttaaccagacgttcgcacctcagcctggagttccgcgttcacactgctgaaccc
aagcttgtaaccgagtgtctcgtctctgctccccggctggacatggaggagaactcgtgt
gagacgcagttagagaagacagagggggtgacccagccctcctcagctgtccctccctat
cagaccttgaaacccccagtcaatgattctgaagacagctccaagtccttcccttcagag
tgtcccaagactccgtctggctcacctggaacagagcatgcgggcaaatggacccacttg
acagagtttgagttgagtggactcaaggccctggtggagaagctggaatcccttccggag
acgaagagatgtgttccagagggcatcgaggatccacaagcactgctagatgacgtgaag
gttgtcttgaaggaacatgccgatgacaatccaaagttggccatctctggttctcctatt
gtatgctggccaaagaagtcaggcaagccacggccgcttaatcggccaaaacccaagatg
ggctcatctccatccgctgctccgtgctcggcagcaggtggagcgaagctctcatccagt
cgtggttcatctagtgccaggcgcagacgaacacgctgcaggaagtgcgaggcatgtaca
cgcaaagagtgtggggagtgccacttctgcaaggacatgaagaagtttggtggaccaggc
cgcatgaagcagtcctgcatcatgagacagtgcatagcgcctgttctacctcacactgct
gtgtgtctggtgtgtggagaggctgggaaagaagacacagtagagaacgaggaggacaag
ttcaacttgatgctcatggagtgcgctatctgcaatgagatcctccatccagattgtttg
aaggagaaggatgctggtggcattgtgaatgatgagttgccaaattgctgggagtgtccg
aaatgcaatcacgctggaaagacagggaaagccacaaagcaaaaaagaggcccagggttt
aagtacgcatccaatctccctggctctctgctcaaagagcagcggatgatcagggacata
aaggaagagccagactcgaacatgtctacagagtcctacacctctactgtttcaccggtc
atgaagaagaagacagaacgagaggacaatcctacctgcaagtcagaagacgcacttaag
aaacgttcccccaaaatggaggacaacccactccgcaagaagagaaaactctttgaaaag
gactctgactcagattgcaatgtcaggaaaaagaagaagcgctcaaagcctgatgctctc
tcagcatctaatgtcctgggacagatcaagacagaaagagaggatgatgaggagtatgat
gaggataacagacaagaactagagaggaaacccttcagttttgtgccctcagaagaagat
gatggagatgatgaaagggaggaagaagaagaggagacgatgaaagagaagagtagccga
gaggagaacggcaagattttacacaagacctctgctacggaaggtgaccaatcacaggga
cgttgtacccaggcggggcctagcagcgactcaggagttgatgcacagttgaggatccag
cgaaaaaccaaacgcaaacctcgcctgcccaacaaagaactaagcaaagaactgagcaaa
caactcaaccaggagatccaaaagacagaggatcgtctggctcatcaaaatggcaggaca
gtaaagacagaaccagatagtgatggagaggacagaaaaccactgaataatggcagcagc
catctgagagactggctggggcctaagcgtgaactaaacggatccttgcgagaacagtcc
ccggcgagttggatcaggactacacctacccctgtcttccggccaacaccttgccgctct
ccaccgaaatgtgttcagatggagcggcatgtcattcgcccccctccgatcagccctcca
ccagaccgactgcctctagatgatggcaagaatcatatcatgcgcagagaggtgtggatg
gcagtgttcagccaccttgcacaccaagacctgtgtgtctgcatgcgggtctgcaagacc
tggaacagatggtgttgtgataaaagactgtggaccaagatcgatctgaaccggtgcaag
gcaatcactcctctcatgctgagcggcattatccgaagacagccggtctccctggacctg
agctggaccaatatctccaagaagcagctcagctggctaatcaacagattacctggtctg
agggttttgttgctggcaggctgctcgtgggcagctgtatctgctttatgcacatccagt
tgtcctttgctaagaactctagatgtgcagtgggtagagggactcaaggacaaccagata
agagacttactctctccgccaacagacaacagaccaggtcagttggacagtagaagtaaa
ctgaggaatgtggaggatctctgtctagctggtctggacatcacagatgcgtccctgaag
ctgatcataaaacacatgccttcactgtctcagttggaccttagttactgtaaccacatc
accgaccagagcgtcaacatccttacggcagccggcaccacgaccagagactctctcact
cacatcaacctgtcagtttgtaacagagttacagacctgtcattgacctacttcaagcgc
tgcggaaacatttgtcacattgaccttcggtactgcaaacaggtgaccaaagagggttgt
gagcagttcatcgcagagatgtctgtcagcgtgcagttcggacttgttgaggaaaaacta
ctgagcaaactgagctag

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