Ctenopharyngodon idella (grass carp): 127521556
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Entry
127521556 CDS
T08802
Name
(RefSeq) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04060
Cytokine-cytokine receptor interaction
cide04672
Intestinal immune network for IgA production
cide04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127521556
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127521556
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
127521556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cide04052
]
127521556
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127521556
Cytokines and neuropeptides [BR:
cide04052
]
Cytokines
Chemokines
127521556
Glycosaminoglycan binding proteins [BR:
cide00536
]
Heparan sulfate / Heparin
Chemokines
127521556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
127521556
NCBI-ProteinID:
XP_051766859
LinkDB
All DBs
Position
10:7799607..7808790
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AA seq
99 aa
AA seq
DB search
MDSKVLALVALLTLAIWSPETDAKPISLVERCWCRSTLNTVPQRSIREIKFLHTPSCPFQ
VIAKLKNNREVCINPKTKWLQQYLKNAINKIKKSKKRSE
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaaagttctagcgctggtggccctgctgacgctcgccatatggagcccagag
acggacgctaaacccatcagtctggtggagagatgttggtgccggtccactctcaacacc
gtcccgcagaggagcatccgtgagattaagttcctccacacacccagctgcccgttccaa
gtcattgccaagctgaagaacaacagagaggtctgcatcaaccccaagaccaaatggctt
cagcagtatctaaagaatgccattaacaaaataaagaagtcaaagaaacgttcagagtaa
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