Ctenopharyngodon idella (grass carp): 127522541
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Entry
127522541 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Sp1
KO
K04684
transcription factor Sp1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04137
Mitophagy - animal
cide04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127522541
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127522541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127522541
03029 Mitochondrial biogenesis [BR:
cide03029
]
127522541
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
127522541
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
127522541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
127522541
NCBI-ProteinID:
XP_051768588
LinkDB
All DBs
Position
11:15856567..15870530
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AA seq
672 aa
AA seq
DB search
MSDLKKREKLAPSHIMSDQQQNQMAALVENDTSFIQKRNSSTPQDSQQPSPLALLAATCS
RIDENDAVEQQSQQSQAQDSQISLQQLSHATNGWHIIPASSQAVTSSSNVTSSSEDKSRQ
TGSVVQPQYVMASSQNLQSQQVLTALSGVMPNIQYQVIPQFQTVDGQQLQFAQTAQDVST
TASGQFQLVSSPNGNQQLIAAPANRGAGNILTVPGLFQQAIPLQNISLGGTVLPSQSQFL
TNMPVPLNANITLLPVGSGTPVGSGSDANAGGNLGTSQQLLQCTSSTTPVEYCTTSTTST
RTATSGIVTLTQSSKGETGKPFQNMSSDNRDGQKPCQAQILIQPQQVLQTVQPGSVSAGG
QVFATQTLSQDGVQNVQIQTIANGSPILIRTVGPNGQVSWQTLQLQSPANTQITLAQAGT
PGTMQLSGLQTINLNTLGNAGLQMHQLQGVPITIANTTGDVSGAGGDGLEDSSVMDENVE
SSPTPTSRRTRREACTCPYCKDGEGRNDPNKKKQHICHIPGCGKVYGKTSHLRAHLRWHT
GERPFVCSWSFCGKRFTRSDELQRHKRTHTGEKKFSCPECPKRFMRSDHLSKHIKTHMNK
KGSAGAVSSTDNTITTATSADSCAAGDVTADQQTLVTMGTLSSEGFTRLEPSGISVMQVT
DLHSINLNSNGY
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttaaagaagcgtgaaaaactcgcgccttcacacattatgagcgatcaacag
cagaatcaaatggccgcgctggtggagaacgacacgagcttcattcagaagagaaactcc
agcacgcctcaagactcgcagcagccttcacctttagcgctgttggcagccacctgcagt
cggattgatgaaaacgacgctgtggaacagcagtcacagcaaagccaggcacaggactcc
cagatcagcctccagcaactgtcacatgccaccaacggctggcacatcatccccgcaagc
tctcaggctgtcaccagctccagtaatgtaacctcttcctcggaggacaagagcagacag
acggggtctgtggtgcaaccgcagtatgtgatggcgtcctcgcaaaacctacaaagtcaa
caggtgctaactgccctctctggtgtgatgccaaatatccagtatcaggtgatcccacag
tttcagactgtagatggacagcagctccagtttgctcagacagcccaggatgtgtcaacc
acagcatctgggcagtttcagcttgtgtcctcgcccaacggtaaccagcagctcatcgct
gcccccgccaacagaggtgctggtaacatcttaaccgtccctggcctttttcagcaagca
atacctttgcagaacatcagtctgggcggtactgtgctgcccagtcagtcgcagttcctt
accaacatgcctgtgccactgaatgctaacatcacccttctcccggtgggctctggtacg
cctgtcggatctggaagtgacgcaaacgctggaggaaatttaggaacttctcaacagctg
ctccagtgcacgtcgtctacaactccagtggagtattgcactacttctaccaccagcaca
cggacggctacatcaggcatcgtaacactaacccagagtagcaaaggagagacgggaaag
cccttccagaacatgtcgtctgataacagagacggacagaaaccgtgtcaagcgcagatt
ctcattcagccgcagcaggtcctgcagaccgttcagcccggctcagtctcggccggtggt
caggtgttcgcaacacagactttgtctcaggatggagtgcagaatgttcagatccagacc
atcgcgaatggaagccccatcctgatccgtaccgtaggtccgaacggccaggtcagctgg
cagacccttcagttgcagagccccgctaacacccagatcacattggcacaggccgggaca
ccaggaaccatgcagctctctggccttcagaccatcaacctgaacacgcttggcaacgca
gggctgcagatgcatcagctgcagggtgttcccatcaccatcgccaacacaacaggtgat
gtgagtggtgcgggtggagacggtctggaggacagcagtgtgatggatgagaacgtggaa
agcagcccaacaccaaccagcagacgcacgcgcagggaagcctgtacctgcccgtactgc
aaagacggagagggacgcaatgaccccaataagaagaaacagcacatctgtcatattcct
ggatgtggcaaggtatatgggaaaacgtctcatctccgggcacacttacgctggcacaca
ggagagagacccttcgtttgctcctggtccttctgcgggaaacgtttcacacgctctgat
gagctgcagagacacaagaggacacacacgggtgaaaagaagttctcatgcccagagtgt
cccaaacggttcatgcgtagtgaccacttgtccaagcacatcaagacccatatgaataag
aaaggatctgctggtgcagtgagcagcacggacaacaccatcaccactgcaacctctgct
gacagctgtgctgcaggtgacgtgacggctgaccagcagactctagttaccatgggcacg
ctgtcatccgaagggtttacgcggttagagcccagtggcatcagtgtcatgcaagtcaca
gatctgcactccatcaatctgaatagcaatggctattaa
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