Ctenopharyngodon idella (grass carp): 127523021
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Entry
127523021 CDS
T08802
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127523021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127523021
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127523021
Membrane trafficking [BR:
cide04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
127523021
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127523021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
NOD2_WH
FISNA
nSTAND3
AAA_16
AAA_25
Motif
Other DBs
NCBI-GeneID:
127523021
NCBI-ProteinID:
XP_051769411
LinkDB
All DBs
Position
2:35604636..35608032
Genome browser
AA seq
679 aa
AA seq
DB search
MMDEHKNHVAVSAAAERSKKLRQFHQKIQEKKMGGFRFKAALAFDMSFRSLIFPFGPDSP
STTVSYPFFSDAQKSASQLKEKPDRWQIEKIYGKGKDWSSMNLWYRTTVTDRCKFVTEYN
PPSNERVELGARYTEPVIIQRSKEQNEKYYHEHVRSAQASETKTSSQLLSNDKNHSIKID
QLFSPDSDGNTPKTVILSGDSGRGKSFTLQKIMLDWASGELYSENFAVVFLLRCEELKCI
SDVKSLIELLSCSSSFTSDQISQILELTPEKVLILIDELVEYESCSLINFIPHTNPSKRA
PPMVILGLLLKGVLLPESFMLVTMRSIAADTVMNLLKGPLRFTEIVGFSERGVQEYFHKF
FQDEQLFKNTYESVKTNESLLTSCSVPLLCWMVCFCLKKYSTDSQVMVKKLKTTTSIYVH
FVSALLEHHGQSKYVLTTLRNLGQLAQRGIQNQQVFFDEKDVAETGLVATKCLFLYKDYV
NGKEKPEPVFKFMHFSFQWFFAALWVLLDEEESWWKVSELLNLMGSAIVECLSLERRSNP
IPSVLLFFYGLLNEEVISSLFKKIKLTVSHTIKLRKRKLKKTLKQRILTMTTWHGCELYV
LHCLYELQNVGFERKVLEAHSFMDLSNISLRSTDCWVLLYCLQCCPHIRELNLMYCDLTA
DKLKILQPALCMCETLRSV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgagcacaaaaaccatgtggctgtatcagctgcagcagagaggagtaagaaa
ctgagacaatttcatcagaaaatccaggagaaaaagatgggcggttttcgttttaaagca
gctttagcttttgacatgagtttccggtctctcattttcccttttggaccagactcaccg
agcaccactgtcagttatcccttcttttctgatgcacaaaaatctgcctctcagctgaaa
gagaaaccagatagatggcaaatagagaagatatatggaaagggaaaggattggagcagc
atgaatctttggtacaggacaacagtcactgacagatgcaagtttgtgacagagtataac
cctccatctaatgaacgtgtggaactgggcgctcgttacactgaaccagtgatcattcag
aggagcaaagagcagaatgagaaatactatcatgaacatgtgaggtctgctcaagcttct
gaaacaaaaacatcatctcaactgttatcaaatgacaagaatcacagcatcaaaatagac
cagctgttcagtcccgacagtgatggaaacacgccgaaaactgttattctcagtggtgat
tctggaagaggtaagtccttcacgttacagaagatcatgttggactgggcttctggagaa
ctttactctgaaaactttgctgtagtttttctgttaaggtgtgaagagttgaagtgtatt
tctgatgtgaagagcttgattgagctcttgagctgcagtagcagttttacatcagatcag
atctcacagatactagagttaacaccagagaaagtccttatcctcattgatgaattggtt
gagtatgagtcttgttcactcattaatttcataccacacactaatccatccaagagagcg
ccacctatggttattcttgggctcctgttgaagggagtcttgctacctgaatcattcatg
cttgtaactatgagatctatagctgctgatacagtgatgaatctcctcaagggacctctg
cgtttcactgagattgtgggcttctctgagagaggggtgcaggagtacttccacaagttc
tttcaggatgagcaactcttcaagaatacatatgagagtgtgaagacaaatgaaagcctc
cttacttcctgctctgtgcctttgctatgttggatggtctgtttttgtctgaagaaatac
tcaactgatagtcaggttatggtgaaaaaactaaagacaaccacctccatatatgtgcac
tttgtgtctgctctactggagcatcatggacagagtaagtatgtcctcaccacgctgagg
aatctaggtcagctggcacaaagaggaatacaaaatcagcaagtcttttttgatgaaaag
gatgtggcagagactggcttagttgccaccaagtgtctgttcttgtataaagattatgtt
aatggaaaagaaaaaccagaaccagttttcaagttcatgcacttcagctttcagtggttc
tttgctgctctttgggtcttgcttgatgaagaagagtcctggtggaaagtcagtgagctg
ttgaacttgatgggctcagctatagttgaatgcctatctctagaaagaagatcaaatccc
atcccatcagttttgctgttcttctatggtctcttaaatgaggaggtgatcagctcactt
tttaaaaaaatcaaattaactgtctctcacaccataaaactgaggaaaagaaaactgaag
aaaacactgaagcaaagaattcttacaatgacaacatggcatggatgtgaactatatgtt
ctccactgtctgtatgagctccaaaatgtggggtttgaaaggaaagttctggaagctcac
agcttcatggatctgtctaacatttccctgaggagcacagactgttgggtgctgctgtac
tgtcttcagtgctgtccacacatcagagaactgaacctcatgtactgtgatctaacagct
gataaactcaagattcttcagccagcactctgtatgtgtgagactctgaggtcagtgtga
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