Ctenopharyngodon idella (grass carp): 127523459
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Entry
127523459 CDS
T08802
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04140
Autophagy - animal
cide05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127523459
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127523459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127523459
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127523459
Membrane trafficking [BR:
cide04131
]
SNARE
SNARE associated proteins
Others
127523459
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
127523459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
127523459
NCBI-ProteinID:
XP_051770136
LinkDB
All DBs
Position
12:4371577..4394724
Genome browser
AA seq
1071 aa
AA seq
DB search
MLATQTPESGPEAKDVKQWIKEKIARTLKALQKRYITTDTAVTSEDLEANLLCCALEAAF
IHGIKSKFIRYDGGNSRKGGSRGALPQPVFWSLLKTVTHRDVVQELERLSFINSDIGRCR
AWVRLALNDGLLECYLTSLLREGSNLSSYYQPGALLLDPEDREVLLTLLQGLASMTFQLS
YKSAVLNEWTNTPLVLAGLCPPTPADEHLLGPKRKESWDTVSQSSGGSGSSDWAQEAIQR
ESRKEQSEGCETSTPLTSSNLSLNTSGSSQLSSSLSSDSLLQGQEPRSPEKERWSCETEV
SHKAQPNTVTEENGSSSQDLKKEDFDMFMPAPHILSDSAKHAVEGKTDISETDTHQLDAH
VTEGSKAGSEKTSAEALQETQEGTAEESEIIVKTTRLKVKHAVTETPEREQKRENRDSSV
ESPSVSTLPETVETTSDLKDPDTLLPETSAAPSSVEQPRHAAYRRSTSTVSRKTSSDSLY
SSCKSTSWISEDDFYKPQETGSSEAYAVIDITQSNGQVTPTSEPDTLQPPPSVVHRRQNG
LPNPFRGLLKLGQLERRSAVGMWWDYYCELSPFELRLYINAEERICYENLSLLRCEDVHL
SSGTEGRFRLTFLGKRIYLRAPSPGEAEDWVDRIMEAISKLRPMMKDEQWEVLQTSSDQE
VPSPAPSSPERTISELPDPPQLDWTRHKDPELDAIKEAVVYQNLEEKGWRPLVLSLSLET
LRGYRVQDDSKTLLFSYPIGTIRDVVPDVSLGSPAFFKILTARDTMTLRAESGEEARGWR
SLIRGALDSYLETEDDGAVQGVSSPGSGHGGSVHKLVQHRLKGDGALLAHLSEVPKERGL
DAQNYKCAGCPRQIGVSLGRARLCEFSGQYYCDSCHQGDATIIPSRMVHNWDLTTREVSR
QAFKLLTQIEHEPLLNLDVLNPDLFDHTDIMATVQTLRQKLRFLGDYIRICRSGISKKIQ
PRLQQRTYLLDNCDVYSVLDLQQIADGHYESYLQSLIEFGSKHVHNCDLCTQRGFICQIC
NSDTIIFPFQFDSTSRCNVCKTVFHSSCKAKCSVCPRCVRIQKYLERDLED
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgctggccacccaaacacctgagagcggcccagaggcaaaagatgtcaaacagtggatc
aaggaaaagatcgcacggacgctaaaagccctgcagaagcgttacatcaccacagacacg
gcggtcaccagcgaggacttggaggcgaacctgctgtgttgtgctttggaggcggctttc
atccatggaatcaagagcaagttcatcagatatgatggaggtaattcgcgcaaaggagga
tcacgaggagcacttcctcaacctgtcttctggagcctgttgaagaccgtcacacacagg
gatgtagttcaagaactggaacgtttaagcttcataaactcagacattggtcgctgcaga
gcatgggttcgcctggctctaaatgatgggcttctggagtgttacctgacatcgctgctt
cgcgaggggtccaacttgagctcctactaccagcccggggctcttctgctggacccggag
gaccgcgaggttcttctcaccctgctgcagggcttggcctcgatgaccttccagctctcc
tataaatcagctgtgctgaatgagtggactaacacaccactggtcctcgcaggcctttgc
ccccccacgcctgccgacgagcaccttcttggccctaaacgcaaggagtcatgggatacg
gtctcacagtcatccggggggtccggaagctcagactgggctcaggaagcgatccagagg
gagtcgaggaaagagcagagcgagggatgtgaaacgagcactccacttacctcatcaaac
cttagtctgaatacgtcaggatcgtcacagctgtcctccagcctgagctctgatagtctg
cttcagggtcaggagcccaggagtcctgaaaaagaacgctggagttgtgaaacggaagtc
agccacaaagcacaaccaaacactgttacagaagagaacggctcctctagtcaggatttg
aagaaggaagactttgatatgttcatgccagctccacacattctgagtgactctgccaaa
catgctgttgaaggaaaaactgacatttctgaaacagacacacatcaattggatgcacac
gtcacagagggatctaaagcgggctcggaaaagacatcagctgaagcgttacaggagaca
caagaaggaacggcggaagaatccgagattatagttaaaaccacaagactaaaagttaaa
catgcagtcactgagactccagaaagggagcagaaaagagagaacagagactcatctgtt
gagtccccttcggtttctacattacccgagactgttgagacgacctctgaccttaaagac
cctgacactcttcttccagagacctctgctgctcctagttcagtggaacaaccccgacat
gctgcatacagacgatccacaagtactgtaagcaggaaaacatcctcagactctctgtat
tcctcctgtaaatccacatcttggatatcagaggatgacttctacaagccacaagaaacg
ggcagttctgaagcatatgccgtcattgacatcacacaatcgaacgggcaggtgacgcct
acctctgaaccagacaccctccagccaccacctagtgtagtgcaccggagacagaacggt
cttcctaacccgttcaggggtttgctgaagctgggtcagctggagcggcgcagtgcggtg
ggcatgtggtgggattactactgcgagctctctccgtttgagctgcggctttacatcaat
gcagaggagcgcatctgctacgaaaacctgtccctgctgcgctgcgaagacgtccacctg
tcctccggcaccgagggccgttttcggctcaccttcctaggcaaaagaatctacctgcgt
gccccatctccaggggaggccgaagactgggtcgatcgcatcatggaggccatcagcaaa
ctacgtcccatgatgaaagacgaacagtgggaggtgctgcaaacatccagtgatcaggaa
gtcccctcgccggcaccctcaagccctgaacgcaccatctcagaacttccagatccacct
cagttagattggacccgtcataaagacccagaactagatgcaataaaggaagcggtggtc
tatcagaacttggaggagaagggttggcggcctcttgtgctctcgctctccctggagacc
ctcagaggttaccgggtccaagatgactccaagacgctgctcttctcataccccattggg
accattagggatgtggttccagatgtttctctaggcagtcctgcgttttttaagattctg
actgcgcgggacacaatgacgctgagggcagagagcggcgaggaagcccgaggatggagg
agcctgatcagaggagcacttgactcgtatctggagacggaggatgatggagctgttcag
ggtgtctcttcgcccggcagcggccatggagggagtgtccacaaactggttcaacacaga
ctgaagggtgacggggcgttgctggctcacttgtctgaggtccctaaggagagaggacta
gacgcgcaaaattacaaatgtgcaggatgccctcggcagatcggtgtgtctctggggaga
gccagactctgtgagttctcaggccagtactactgcgattcctgtcaccaaggagacgca
accatcatcccctcccgcatggtgcacaactgggacctgacaacacgtgaggtctcaaga
caagcctttaagttgctgactcaaatagagcacgagccgcttctgaaccttgacgttttg
aatcctgacctgtttgatcacactgacataatggctacggtgcaaaccctgaggcagaaa
cttcgtttccttggagactacatccgcatctgccgcagcgggatcagcaaaaaaatccaa
cccagacttcagcagaggacatatttattggataactgtgatgtatacagtgtattggac
ttgcagcagatagcagacgggcactacgaatcttacctgcagtctctgattgagtttggg
tccaagcacgtgcacaactgtgacctttgcacccagaggggctttatatgtcaaatctgc
aactccgacaccatcatcttcccttttcagtttgacagcacttccaggtgtaacgtctgc
aagacggtgtttcattcctcctgtaaggccaagtgttcggtctgtccacgctgtgttcga
atacaaaagtatttagagagagacttggaggactaa
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