Ctenopharyngodon idella (grass carp): 127523901
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Entry
127523901 CDS
T08802
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00514
Other types of O-glycan biosynthesis
cide04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
127523901
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127523901
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cide01003
]
127523901
Enzymes [BR:
cide01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
127523901
Glycosyltransferases [BR:
cide01003
]
Glycan extension
O-Glycan
127523901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
127523901
NCBI-ProteinID:
XP_051771025
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All DBs
Position
12:1182020..1195707
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AA seq
374 aa
AA seq
DB search
MHLSHVGTNKICFLLSLAFCALLVLLIPSLQPPQRQTDLPQPRPRAKPARHDLYGNPGQG
SHGAKDGSFIHPLPPGGRPQDPQRLLEGDAANANAPGSRSKDSLDLRDIFIAVKTTRKYH
KSRLQLLSQTWVSKAKEQTFIFTDQEDKELKQKAGLNIINTNCSAAHTRQALCCKMSVEY
DKFIESQKKWFCHVDDDNYVILPSLLELLSSYSHTQDVYLGRPSLDHPIEAAERVKSDGS
VSVKFWFATGGAGFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTVGYIIEALLEVPL
THTGLFHSHLENLQRLPTDNILKQVTLSYGGFENRRNVVSVGGVFSLAEDPSRFKTVHCL
LYPDTEWCPRKTRH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatcccatgtcggcaccaacaaaatctgcttcctgctttccctggcattttgt
gccctactggtgctccttattccctccctgcaacctccgcagcgtcagacggatctgccc
caaccgcggccccgtgccaagcctgccagacacgacctctacgggaaccccggccaagga
agtcatggtgccaaggatggtagtttcattcacccacttcctcccggaggacgaccccag
gacccgcagaggttgttagagggggacgctgcaaacgccaatgcccccgggtcccgttcc
aaagactctttggatttgagagacatttttattgccgttaagaccaccaggaaatatcac
aagtccagactgcagctcctgtcccagacatgggtgtccaaagccaaggaacagacgttt
atcttcactgatcaagaggataaggagctcaagcagaaagcagggctcaacatcatcaac
accaactgctccgcggcgcacacgcgtcaagccctgtgctgcaagatgtctgtggagtat
gacaagttcatcgagtcacaaaaaaagtggttctgtcacgtggatgatgataactatgtg
atcctgcccagtttgctggagctgctgtcgtcctactctcacacacaggacgtgtacctg
ggaagacccagtctggaccaccccatcgaggccgccgagagggtcaagagcgacggatcg
gtgtcggtgaagttctggtttgccactggaggagctggattctgcatcagccgaggctta
gcgctcaaaatgagtccatgggcaagtcttggaaacttcattacaactgcagagaagatc
cgcctcccagacgactgtacagtaggctacatcatcgaggccttgctggaagttcctctg
acacacacaggcctgtttcactcacacctggagaatctccagagactccctacggacaac
atactcaaacaggtgaccctcagttatggtggattcgagaacaggaggaatgtggtcagt
gtcgggggagtgttctcattggctgaagacccttcacggtttaaaacggttcactgccta
ctctaccccgacactgagtggtgcccacgcaagactcgtcactga
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