Ctenopharyngodon idella (grass carp): 127524401
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Entry
127524401 CDS
T08802
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127524401
04020 Calcium signaling pathway
127524401
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cide01001
]
127524401
Enzymes [BR:
cide01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127524401
Protein kinases [BR:
cide01001
]
Receptor tyrosine kinases (RTK)
RET family
127524401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CLD1
RET_CRD
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
127524401
NCBI-ProteinID:
XP_051771801
LinkDB
All DBs
Position
13:complement(9747404..9774305)
Genome browser
AA seq
1109 aa
AA seq
DB search
MGTTRGIVWGDIAVLLLLLSEGSLGLYFPQSVYTESIFVGQPQGSPVLQVHSMLESSKER
PYFFLCSHRETFAPWFHMDEASGVLSMNKTLEWSDFSSIRSSSGRSQKDLNLKVGVSPVP
PQKGMCMFLPKVEVKLVFINDTAPSCGQVKLSTLCYPDKDSNPHIIENRMPGALRQLQRF
TRMSICPNYTISYGVEAESPVPFAVDGSTSELVVTAPVDREEKEVYHLDIVCMIQTEEEL
HKYFTSLHLNIYDEDDNPPYVNGTDSEDIIIEFNRSEGTVYGTLFVYDRDTTPVYPTNQI
QNKLVGTLMTNDSWIRNTFTIEHKFREEKAIFGNVRGTVHEYKLKLSQNLSVTEQRSFQL
DYLVNDTTFPGPEGTVLLHFNVTILPVPIRFSNITYFFTVSKKATTYSQIGNVCVDNCLK
FKGIYVTYQLEIADRNISADAQSCYMAVSLAQTPNDKTGVLYVNDTEVLRRPQCQELQYV
VIAQEQQNNFQAKTQLVIIFEGEAELMRLDEQRVLACAEKRQRGECEASRGLGAPTGRCQ
WRQGKDKGISKKYSTCSPDLRTCPDGYCDAIESKNISICPQDCSSLPIIGGYERDLYGIK
AGHGTCYCFSGKCFCEKDELPEAFCDNTCKTVIATGVLLSFIVSIILSSYFLHRYHKSTP
KPPIASAEMTFRRPAQSYPISYSANNVRRASLDSMENQVAIDTFKIPEDPKWEFPRKNLV
LGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNHP
HVIKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMSNDANRNSSYLENPDERA
LTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY
VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLK
TGYRMEKPENCTDEMYNLMLRCWKQEADKRPTFSDISKELEKMMVKSRDYLDLAASTPAD
ALLYDDSLSEEDTPLVDCSNAPLPRTLPSTWIENKLYGMSYPNWPEKSPVPLNRLDATNP
VFTRYANDSVYANWMALHSPAKIVDTLDS
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgggaactacgcgtggaatcgtttggggagacatcgctgtgctccttcttctcctatct
gaaggttcacttggactgtattttccacaaagtgtctacacagaaagcatcttcgtgggt
cagccgcagggatcaccagtgcttcaggtccattcaatgctggaaagctctaaagagagg
ccctatttcttcctgtgctcccacagagaaacttttgcaccatggtttcacatggatgag
gcatctggagtcctttcaatgaacaaaaccctagagtggagtgatttcagtagtatacgc
agcagctcgggcaggtcccagaaggatctcaacctgaaggtcggagtctctccagtgccc
ccgcagaaagggatgtgcatgttccttcccaaagtggaggtcaaactggtgttcattaat
gacacagcgccctcctgtggtcaggtcaagctgagcactttgtgctaccctgataaggac
tcaaacccccacatcatagagaaccgtatgccaggggccctgcggcagctccagcgcttt
acccgcatgagcatttgccccaactacaccatcagttatggcgtggaagcagaatctcca
gttccatttgcggtcgacggctccacttcagaactggtggtcactgcacctgtggaccgt
gaggaaaaggaagtgtaccatctagatatagtgtgcatgatacagacagaagaagagctg
cataagtactttacttctctgcacttgaacatctatgatgaggatgataatcctccttac
gtgaatgggactgacagtgaggacatcataatagagtttaaccgcagtgagggtactgtc
tatggaactctgtttgtatatgacagggacacaacgcccgtttatcccacaaaccaaatt
caaaataaattggtgggcaccctaatgacaaatgactcctggatcagaaacacttttact
attgaacacaaatttagggaagaaaaggccatctttggcaatgtccgcgggacggttcat
gaatacaagctgaaactcagtcagaatctgtctgtgactgagcaacgttcatttcagttg
gactacctggtcaatgacaccacttttccgggccccgagggaacagtgctgttacatttc
aatgtgactatcctgccagttcctattcgcttctccaatatcacctacttcttcactgtc
tcaaagaaagcaacgacatactcccagattggaaatgtctgtgtggacaactgtctgaag
tttaagggcatttatgtcacatatcagttagagatcgcagacaggaacatctctgctgat
gctcagtcgtgttacatggcagtcagccttgcacagaccccaaacgataagactggtgtg
ctctatgtgaacgacactgaggtgttacgcagaccgcagtgccaagagctgcagtacgta
gttattgcccaggagcagcagaacaattttcaggccaagactcagctcgtcatcattttt
gagggtgaagcagaactcatgaggttggatgagcaacgagttttggcttgtgcagagaag
agacaacgaggggagtgtgaggcgtctcgaggcctgggagcccctacaggcagatgccag
tggagacaaggcaaagataaaggaatatctaaaaagtactccacctgttcccctgacctc
cgcacgtgtccagatggttactgtgatgccattgagagcaaaaacatatccatatgtcct
caggattgctccagtctgcccataattgggggttacgagagggacctgtatggaatcaaa
gctggacatgggacctgctactgtttttcaggaaagtgcttctgtgaaaaggatgaattg
ccagaggctttttgtgacaacacgtgtaagaccgtcattgcaactggtgttctcctatcc
ttcattgtctccattatcctgtcctcatactttctccaccgttatcacaagagcacacct
aagccacccatcgcctcagctgaaatgaccttccgccggccggcccaatcctacccaatc
agttactcagccaataacgttcgtcgagcttctcttgattccatggagaatcaggtggcc
attgacaccttcaaaatacctgaagatccaaagtgggagttcccacgaaaaaacctagtg
cttggtaagactcttggagagggagagtttggaaaggttgtgaaggccacagctttccgg
ctcaaaggaaaagctggatacactacagttgccgtaaagatgttgaaagaaaatgcgtct
cacagtgagcttcgagacctcctgtcagagttcacattgctcaagcaggttaatcaccct
catgtaataaaaatgtatggagcttgcagccaggatggtccattatacttaattgttgaa
tacgccaagtacggctcactgcggaacttcctgagagagagccggaaagttggaccaagc
tacatgagcaacgatgccaaccgcaactcaagctacttggaaaacccagatgagagagct
ctgaccatgggtgacctcatctcttttgcatggcagatctccagaggaatgcagtacctg
gctgaaatgaagcttgttcacagagaccttgctgccaggaatgtactggtggcagaggga
aggaagatgaaaatatcagactttggtttatctcgagatgtctatgaggaagattcatat
gtgaagaggagcaagggtcgtattcctgtcaaatggatggctatagagtctttgttcgat
cacatctacaccacacaaagtgatgtctggtcttttggtgtcctcttatgggagattgtg
actctgggtggaaacccctacccaggcattgctccggaacgacttttcaaccttctgaag
acaggctacaggatggagaaaccagagaactgcacagatgaaatgtacaatctgatgctt
cgttgttggaaacaagaggcagataagcgtcccactttctcagacatcagcaaagaactt
gagaaaatgatggtgaaaagccgagactatctggatctcgcggcttccacgccggcagac
gccttgctatatgacgactccctctctgaagaggacacacccttagtggactgtagtaac
gcccctctccctcgaaccctcccctccacttggattgaaaacaagctctatggcatgtca
tacccgaactggcctgagaagagcccggtaccgctcaacagacttgatgccactaaccct
gtctttacaagatatgccaatgatagtgtttatgcaaactggatggctttgcattctccc
gcaaaaattgtggacacgctcgatagttaa
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