Ctenopharyngodon idella (grass carp): 127525479
Help
Entry
127525479 CDS
T08802
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00900
Terpenoid backbone biosynthesis
cide01100
Metabolic pathways
Module
cide_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
127525479
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cide01006
]
127525479
Enzymes [BR:
cide01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
127525479
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
127525479
2.5.1.29 geranylgeranyl diphosphate synthase
127525479
Prenyltransferases [BR:
cide01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
127525479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
ELF3_helical
Motif
Other DBs
NCBI-GeneID:
127525479
NCBI-ProteinID:
XP_051774012
LinkDB
All DBs
Position
13:complement(26686054..26715187)
Genome browser
AA seq
322 aa
AA seq
DB search
MDGDKRATSERILLEPYMYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLMLEHPEAVRVFTRQL
LELHRGQGLDIHWRDTYTCPTEAEYRAMVLQKTGGLFGLAVGLMQLFSDWKRDLKPLLDT
LGLFFQIRDDYANLNSKEYSANKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTE
NVDIKRYCVDYLEKVGSFAYTRQTLMDLEVEAYRLIADLGGNPELEALMEHLSRMYKEPE
GGASAGQSKELGGGAAASQTKQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatggagacaaaagagcaacttctgaaaggattcttctggaaccatacatgtacttg
ttacagctgccaggaaaacaagtcagaacaaaactgtctcaagcgttcaaccactggctt
aatgtcccagaggataaacttcaggtcattattgaggtgacagagatgctgcacaatgcc
agtctgctgatcgacgatattgaagacagctctaagctgcggcgcggttttccggtggcc
cacagcatctacggcgtgccgtcggtcatcaactccgccaactacgtctacttccttggc
ctggagaaggtgttgatgttagagcaccccgaggccgtgcgcgtcttcacccgccagctg
ctggagctgcaccgcggacagggcctggacatccactggcgggacacgtacacctgcccg
accgaggcagagtaccgggccatggtgcttcagaaaaccggcgggcttttcggcctcgct
gtgggactcatgcagctcttctctgactggaaacgagatctcaagccgcttttggacact
ttgggccttttcttccagatacgtgatgactacgccaacctgaattcgaaagagtacagc
gccaacaagagcttctgcgaagacctgacggaagggaagttctctttccccaccattcac
gccatctggtcccgtcccgagagcacgcaagtgcagaatatcctgcgccagcgcacagag
aacgtggatattaaacgctactgcgtcgactacctggagaaggtgggctccttcgcttac
acccgtcagacgctgatggatctggaagtggaggcctaccggctcatcgcagatctcgga
gggaatccggaactggaggctttaatggagcatctgagtcgcatgtataaagagcccgag
ggcggagcttctgctggccaatcaaaagagcttgggggcggagctgcagccagccaaaca
aaacaatga
DBGET
integrated database retrieval system
