Ctenopharyngodon idella (grass carp): 127525683
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Entry
127525683 CDS
T08802
Name
(RefSeq) toll-like receptor 2 isoform X1
KO
K10159
toll-like receptor 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04145
Phagosome
cide04620
Toll-like receptor signaling pathway
cide05132
Salmonella infection
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127525683
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127525683
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127525683
09171 Infectious disease: bacterial
05132 Salmonella infection
127525683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127525683
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127525683
04054 Pattern recognition receptors [BR:
cide04054
]
127525683
04090 CD molecules [BR:
cide04090
]
127525683
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127525683
Membrane trafficking [BR:
cide04131
]
Endocytosis
Phagocytosis
Toll-like receptors
127525683
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of breast milk
127525683
Pattern recognition receptors [BR:
cide04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127525683
CD molecules [BR:
cide04090
]
Proteins
127525683
Glycosaminoglycan binding proteins [BR:
cide00536
]
Hyaluronan
Cell surface receptors
127525683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_9
Motif
Other DBs
NCBI-GeneID:
127525683
NCBI-ProteinID:
XP_051774404
LinkDB
All DBs
Position
1:12008101..12015456
Genome browser
AA seq
816 aa
AA seq
DB search
MFEFCLFSFIMTTAKLQFACVRGADTMGVRMRLLGAKESIILFILILAQGFEYSRTCKCD
QQYFCNCASNHLQQVPKVPANALGLDLSFNQIESININDLSPYSELKTLNLHKNKLSFIH
KEAFKSQCNLKVLDLSLNNLNKLFSSWFHELKSLQHLNLVGNPYSTLGPASIFQSLVNLR
TLQFGSPSLRVVHKNGLDGLTHLDEMTFIGSNLRSYESGSLKAARPIGSVSLSLQNLFQN
DPELVSKVLQDVSHPETLLTIKDATLRTNTSTEPFKAAKEGGTKSLSFQNVTTSDEAITS
LLQVMNGSPLSYIGLTDVHLIGQGWWQKASYTHYENLYTAYIRNLDIQGFFEFSSMMQLG
FLLMHLHKVSVINGTVFVIPQQTTPLLKNLEYLDLSQNLLSDLTIEPTLFTGLGSYQNLN
TLNVSQNILKSLGLMSRLVTNLKRLIYLDLSHNSFVSMPEKCSWPATLRFLNLSSTKLRT
MTACLPSTLTVLDLSENDLTAFIQRFTQLTTLILTGNRFMKLPQGELFPRLHMLLIQRNA
LRMFNESSLRSFTNLQYLEAGNNNFVCSCEFVSFFKQDVDRFITLLDDRCNYVCDTPFTL
RGDAIESVRLSVFECYMIPAVSVLCSVIIIVLGLIAVTCHKLHVIWYLQMTKAWIQAKRK
PAVGRLSEELRYDAFVSYSQHDAEWVEEILVPELESSQPSFALCLHKRDFRPGRWIVDNI
IDSIEKSHRTLFVLSEHFVTSEWCRYELDFSHFRIVDEHNDSAVLVLLEPIKKETIPKRF
CKLRKIMNSRTYLEWPEDEEKRGEFWSNLRAALQRD
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaattctgtttgttttcctttattatgactactgccaaactgcagtttgcgtgc
gtaagaggagcagatacaatgggagtcaggatgagactcttgggagcaaaggagtccatc
attctttttatattgattttggctcagggctttgagtactctaggacatgtaaatgtgat
cagcaatatttttgcaattgcgcctcaaatcatctccaacaggtcccaaaggttccagcg
aatgctcttggccttgacctgtctttcaatcagattgagtctattaacataaatgatctc
agcccttatagtgagctgaaaaccctaaatttgcacaagaacaagctcagttttatacac
aaggaggcattcaaatctcaatgtaatctgaaagttcttgatctgtccttaaacaacctg
aacaaactgttttcgtcttggttccatgagctaaaatctcttcagcatttgaaccttgtt
ggaaacccttactccaccttgggacccgcttccatcttccagtctcttgttaacttgagg
acgctgcaatttggtagtccttcgctgagggtggttcacaagaatggcttagatgggctc
actcatctggacgagatgacatttattggcagtaacctgaggtcgtatgagagcgggagc
ttgaaagcagcccgtcccatcggttcagtctctttgagccttcagaatctgtttcagaac
gatccagaacttgtctctaaggttcttcaagatgtctcccaccctgaaactctgctgact
atcaaagacgccacactcagaacgaacacttcaactgaacccttcaaagcggcgaaagaa
ggtgggactaaaagcttgagtttccaaaatgtaaccacaagcgatgaagcgatcacctct
ttattgcaggtcatgaatggttctcctttgtcttatattggtctcacagatgtacactta
atcggtcaagggtggtggcagaaagcttcatacacacattatgaaaacttatatacggcc
tacatacgtaatcttgacatccaaggattctttgagtttagtagcatgatgcagttggga
tttctcctgatgcatctccataaggtgtctgtgatcaacggcacagtgtttgtcattcct
caacaaacaactcctctgttgaaaaatcttgaatacttggaccttagtcaaaatctcctg
tcagacctgacaattgaaccgaccttatttacaggtttgggctcatatcaaaacctcaac
acccttaatgtgagccagaacattttaaaatctcttgggctgatgtctcggttggtaact
aaccttaagaggctcatatatttagacttaagtcataatagttttgtttctatgccagaa
aagtgtagctggccagcgactcttaggtttctgaacctttccagcacaaagctacgtacg
atgaccgcttgcctgccttctaccttgacggttctggatctcagcgaaaatgatctgacg
gcgttcatccaaagatttactcaacttactacacttatattgacaggaaaccgatttatg
aaacttccacagggggaattatttccgaggctacatatgttgcttatccaaaggaacgcc
ttgcggatgttcaacgagagctctttgaggagttttacaaacctgcaatacttggaggcg
ggtaacaacaattttgtgtgctcctgcgagtttgtatctttcttcaaacaagatgttgac
cgtttcatcacactactggatgatcgttgcaattatgtgtgcgacactccatttactctc
agaggtgatgctattgaaagtgtcagattgtcagtcttcgagtgttatatgatccctgct
gtctcagtgctttgttctgtgattatcatagtgcttggacttattgctgtcacctgccat
aagcttcacgttatatggtacctgcagatgactaaagcatggatacaagccaaacgaaaa
cctgcagttggtcgactttccgaagagctccgctatgatgcttttgtatcctacagtcaa
catgacgctgagtgggtcgaggagatccttgttccagagctggagagctctcagccttca
ttcgccctgtgtttgcacaaacgggacttccggccgggccgttggattgtggacaacata
atcgactcgattgagaagagccatcggactctctttgttctgtctgagcactttgttacc
agcgaatggtgtcgctacgagctggacttctcacatttccgcatagtcgatgagcacaat
gactccgctgtcctagtacttctagagccgatcaagaaggagaccattcccaagcgtttc
tgcaagctgcggaagattatgaactccaggacgtatctggagtggcccgaggatgaggaa
aagagaggcgagttctggagcaatctgagagccgccttacagagggattaa
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