KEGG   Carya illinoinensis (pecan): 122278006
Entry
122278006         CDS       T08745                                 
Name
(RefSeq) U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
  KO
K13157  U11/U12 small nuclear ribonucleoprotein 65 kDa protein
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122278006
Spliceosome [BR:cill03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    122278006
SSDB
Motif
Pfam: RRM_1 RRM_YTH1
Other DBs
NCBI-GeneID: 122278006
NCBI-ProteinID: XP_042943978
LinkDB
Position
10:91806..109879
AA seq 503 aa
MQQSGFQFLGREEEAKAVAQEAEGVVTLLIRHLPEAIPHDTLSRLFSNYGAFSVRPCSAP
QLRNCAFLDFKNEALAYQAFRQLNGLRFLAKVLSVERASNEPIVDTKLKKSEAHIPPTST
SMFKDATKHTILGSTLASEPIAPRLGVDYPFPPHLEYVYPPPDGNILTNIVNALIAVPRF
YTQVLHLMNKMNIPAPFRMALPTPPLPPSVPAPPPPPPPPSVPAKPHLEDLSSGDSEMES
SDEEIDGEAYLFGASTVKQFSRKRRKQEAIVGPAVDKDVAHEAVGLKPATLVPKEIPMIK
KKNPVLQIKIAPKLIQNEHRDDTTSKELEEPDKEGLDFKPYATSEELESGKLPPEEILSL
PMFKNYTAGNPTSVLYVKNLAKDVVADDFYFIFGSLFGSVDATKSSLSVKLMQEGRMRGQ
AFVTFPSVELAHRALCEDYMDIPLQYGGQTLHLSLLPLHLVCESSQWIRVQRQANDNPVW
PESSSWQNKLELYFSCLAGKSMY
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgcagcagtcgggctttcagtttttaggcagggaggaagaagcaaaagcggtagcacaa
gaagcagaaggagttgtaacccttttgattcgacaccttcctgaagccatacctcatgac
accctctccagacttttctctaactacggtgctttctctgtccgtccttgctctgctcct
caactgagaaactgtgctttcctggatttcaagaatgaagcattggcttaccaggcattt
cgtcaattgaatgggctgaggtttcttgctaaagtcttatcggtggagagagctagtaac
gagccaatcgtggataccaaactgaaaaaaagtgaagctcatataccacccacatctacg
tctatgttcaaggatgctactaaacatacaattttagggtctacccttgctagcgaaccc
attgccccaaggcttggtgttgactatccatttcctcctcacttggaatatgtgtatcct
ccacccgatggaaatatactgactaatattgtaaatgctcttattgccgttcctcgcttt
tatactcaggtgttgcacttgatgaacaaaatgaatattccagctccatttagaatggct
ctgcccactccacccctgccgccttcagtacctgcaccaccaccaccaccacctccccct
tctgtacctgcaaagcctcatttggaagatctgtccagtggtgattcagaaatggaatct
tcagatgaggaaatagatggagaagcttatctttttggagcttcaacagtaaaacaattt
agccgaaagcgtcgcaagcaagaagcgattgtggggcctgcagttgataaagatgtcgca
catgaggctgttggattaaaacctgccaccttggttccaaaagaaattccaatgattaaa
aagaaaaaccctgttttacagatcaagattgccccgaaattgattcagaatgaacacaga
gatgacacaacatcaaaagaattagaggagccagacaaagagggtttggattttaaacct
tatgcaacttccgaagaactagaaagtggaaagttgcccccagaggaaattttatcacta
ccaatgtttaagaactatacagctgggaaccctacatcagtgttgtatgtaaagaacttg
gcaaaggatgtagtggctgatgacttctacttcatttttggatcattatttggaagcgtc
gatgcaactaaatccagtctcagtgtgaagcttatgcaggagggaagaatgagaggacaa
gcctttgtgacatttccatcagttgaacttgcccatcgcgcattgtgtgaggattatatg
gacattccattacaatatgggggtcagacattacatctatctttattacccctacatctt
gtatgtgaatctagtcaatggatacgtgttcaaaggcaagccaatgataatccagtttgg
ccggaatctagcagctggcaaaacaaattagaattatatttttcctgcttggctggtaaa
tcaatgtattaa

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