Carya illinoinensis (pecan): 122279232
Help
Entry
122279232 CDS
T08745
Name
(RefSeq) probable CoA ligase CCL10
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00130
Ubiquinone and other terpenoid-quinone biosynthesis
cill00940
Phenylpropanoid biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
cill_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
122279232
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
122279232
Enzymes [BR:
cill01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
122279232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122279232
NCBI-ProteinID:
XP_042945620
LinkDB
All DBs
Position
10:29122185..29126185
Genome browser
AA seq
544 aa
AA seq
DB search
MKTSYDPKTQTYSSPRPPIEFPTNPNLSLTSFLFQNNSSFPHSLALVDADNGKSMTFHQF
KLHVSKLAHALLRLNIRKNDVVLVVAPNSIDFPVCFLAIVALGAIASTCNPSYTVAELSK
QVTDCNPKLIITVPELWHKIEKFNLPSIIIPSSNSTSIRNMTTSKIWYYSELIKSIRACD
FPATNVTQSDIAALLYSSGTTGTSKGVILTHQNFIATSLMMTADQDRYGDPKNVYLCFLP
MFHAFGLVSITYAQLRRGNTVVSMGKFEFEKMLGVVEKYRVTYLSVVPPVMILLAKRNAV
LKKFDLSSLKRIGSGAAPLGIDVMEECAKNLSHAAITQGYGMTEACGLISFENPREESRL
SGSAGTLVPGVESQIISTDTLKPLPPNQMGEIWVRGPNMMKGYFNNLEATKLTIDGQGWL
HTGDLGYFNEEGQLFVVDRIKELIKCDAFQVSPAEIESLLISHPEISDAAVIPFPDPKSG
EVPIAYVVRAPNSSLTEEDVQEFIGKQVAPFKRLRAVTFVESVPKSASGKILRRVLIDKV
RSKI
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatcctacgatccaaagacccaaacctactcatctccacgaccgcccatcgag
tttcccaccaatcccaacctctccctcacctccttcctcttccaaaacaactcctctttc
ccacacagcctcgctctcgtcgacgctgataatggtaagtcaatgacattccaccagttc
aaactccatgtctccaagctcgcccatgctttgctccggctcaacatccgaaaaaatgac
gtcgtcctcgtcgtcgcccccaactcaattgacttccccgtttgcttcctcgcgatagtc
gctctcggtgctatcgcttcaacctgtaatccttcttacactgttgcggaactctcaaag
caagtcacagattgtaaccccaagctcatcatcaccgttcctgaactatggcacaaaatc
gaaaaattcaatttgccatcgataatcataccttcctcgaattccactagcattaggaat
atgactacttcaaaaatttggtattactctgagttgataaaatctattcgagcttgtgat
tttcctgctacaaatgtcacgcagagcgatatagcagcccttctgtattcatccggcacg
accgggacaagcaagggagtgattctaacgcatcagaacttcatcgcaacgtcgctaatg
atgacggccgatcaggaccgatacggcgacccaaagaacgtgtatctgtgttttctgccg
atgtttcatgcgtttggcctcgtgtctatcacgtatgcacagcttcggagagggaacaca
gtggtttcgatgggaaagtttgaatttgagaagatgttgggggtggtggagaagtatagg
gtgacttatctgtccgttgttccgcctgtgatgattttgctggcaaagcggaatgctgtg
ctgaagaagttcgatttgtcatcattgaagcggattgggtcaggtgctgctcctctggga
atagatgttatggaggagtgcgcgaaaaatctctctcacgctgcaattactcagggatat
ggtatgacagaagcatgcggactcatttcattcgaaaatccaagggaagaatcccgcctt
tctggttcagccggaacacttgttccgggagttgaatcccaaataattagcactgatact
ttaaagcctcttccaccgaatcaaatgggtgaaatatgggttcgaggacctaatatgatg
aaaggttatttcaacaatctggaagccacaaaactaactatagatgggcaaggatggtta
cacactggagatcttggatattttaatgaagagggacaattattcgtggtagatcgaatt
aaagaactaattaagtgtgatgcttttcaggtgtcaccggcagagattgaaagcttgcta
atttctcaccctgaaatatcagacgccgctgtgatcccatttccagaccctaaatctggt
gaagtcccaattgcatatgttgtccgtgctccaaacagctcgttgacagaagaagatgtt
caggaatttatcggaaagcaggtcgcaccatttaaaagattacgggcggtaacttttgta
gaaagtgtcccaaagtcagcttcggggaagattttgaggagggtgcttatagacaaagtc
cgatcgaagatatag
DBGET
integrated database retrieval system