Carya illinoinensis (pecan): 122301030
Help
Entry
122301030 CDS
T08745
Name
(RefSeq) probable CoA ligase CCL8 isoform X1
KO
K18660
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00061
Fatty acid biosynthesis
cill00280
Valine, leucine and isoleucine degradation
cill01100
Metabolic pathways
cill01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122301030
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
122301030
Enzymes [BR:
cill01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
122301030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122301030
NCBI-ProteinID:
XP_042968022
LinkDB
All DBs
Position
2:complement(32664078..32673427)
Genome browser
AA seq
613 aa
AA seq
DB search
MSPSSFKSVNYHLFRPPFTLSFGSLLRKLTTPLACVYPSRLYSSSSSGTLMEVVKEVVKQ
GSAAGDGVAIRADKRSYSYVQLISSALKISNILSSNDLKTGYKESKYEESSLSVDGVGEL
GHLRGARIGIVAKPSAEFVAGMLGIWLSGGVAVPLALSYPEAELLHVMNDSDVSMVLSTE
DHHEFLQEVASKCAARFSLIPPLPSVSSQKNASDHPQPGEIDEHGIFQGNIKSSSEDPAL
IVYTSGTTGKPKGVVHTHRGITAQVQTLKEAWGYTSDDRFLHCLPLHHVHGLFNALLAPL
YAGSTVEFMPKFSVRGIWQRWCESYPIKGTRADDAITVFTGVPTMYTRLIQGYEAMDPEV
QAASASAARQLRLMMCGSSALPQPVMQQWQTITGHRLLERYGMTEFVMAISNPLRGMRKA
GTVGKPLPGVQVKILPEDKNGDDIDGVGELCVKSPSLFKGYWKLPEVTKESFIDGGFFRT
GDAGKVDEDGYYVILGRTSADIMKVGGYKLSALEIESVILEHPAVTECCVLGLPDKDYGE
AVCAIIVPDANTKKIQEENLKPAVTLEELCSWAKEKLAPYKLPTRLFLWEALPRNAMGKV
NKKELKKLLAAEQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtccatcctcatttaagtccgttaactaccacttgtttaggcctccttttactctg
tctttcggttctttgctgaggaagctgacgacacctcttgcttgtgtctatccatcccgg
ttgtattcgtcatcaagttctggtacattaatggaggtagtcaaagaagttgtcaagcaa
ggttctgcggctggtgatggtgtagctattagagctgataagcgaagttacagctacgta
caactcatttcctcggcattgaagatatctaatattttaagcagtaatgacttaaaaact
ggctacaaagaaagcaaatatgaagagtcttctctctctgttgatggtgtgggagaactt
ggacatcttcgtggagctcgaataggaattgtggccaaaccttcagctgagtttgttgct
ggaatgctagggatctggttgagcggaggtgttgctgttccgcttgcactctcctaccct
gaggctgagctgctacatgtgatgaatgattcggatgtttccatggtactaagtactgag
gatcatcatgagtttctgcaagaagttgcatcaaaatgtgctgctagattttctcttatt
ccaccccttccgagtgtttcttcacagaaaaatgcatctgatcatccacaacctggagaa
atagatgaacatggaatttttcaggggaatattaagagctcaagtgaggatccggctctg
attgtatacacaagtggtacaacaggtaaacccaaaggagttgttcacacgcacagaggc
atcactgcacaggtacaaacgttgaaagaagcttggggttatacatcggatgaccggttt
ttgcattgcctaccgctacatcatgttcatgggctttttaatgctttactagcccctctc
tatgcgggttcaacggttgagttcatgccaaaatttagtgtaaggggaatttggcagaga
tggtgtgagtcatatccaatcaaggggactagggccgatgatgccataactgtgtttaca
ggagttccaactatgtacactcgattgatacaaggttatgaagcgatggatccagaggta
caagctgcttccgcctctgcagcaaggcagttgcggcttatgatgtgtggctcctcggca
cttcctcaacctgtcatgcaacaatggcaaacaatcaccggacatcgcctgttggaacga
tatggcatgactgaatttgtcatggcaatatcaaatcctttaagaggtatgcggaaggct
ggcacggttggcaaaccacttcctggtgtgcaggtcaagattctaccagaggataagaat
ggagatgatatagatggggtgggtgagctttgcgttaaaagcccttcattgtttaaggga
tattggaaacttcctgaggtaactaaggaatcatttattgacggtggcttctttaggact
ggagatgctggtaaagtggatgaagatggatactatgtcattttggggcgtacaagtgct
gatattatgaaggttggcggatacaaattatctgctctagaaattgaatcagtcattttg
gagcatccagctgtcacagaatgttgtgtgttgggcttaccagacaaagattacggagaa
gctgtctgtgcaattattgtgcctgatgcaaacacaaagaaaatacaggaggaaaatttg
aaacctgcggtaaccttggaggaactctgctcttgggctaaagaaaaacttgcaccatac
aagctaccaacccgcttgttcctatgggaggcgctgcctcgtaatgctatgggaaaggtg
aataaaaaagagttgaagaaactgctggcagccgagcagtaa
DBGET
integrated database retrieval system
