KEGG   Carya illinoinensis (pecan): 122305097
Entry
122305097         CDS       T08745                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03008  Ribosome biogenesis in eukaryotes
cill03013  Nucleocytoplasmic transport
cill03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122305097
   03008 Ribosome biogenesis in eukaryotes
    122305097
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122305097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122305097
   03009 Ribosome biogenesis [BR:cill03009]
    122305097
   03016 Transfer RNA biogenesis [BR:cill03016]
    122305097
   03036 Chromosome and associated proteins [BR:cill03036]
    122305097
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cill04147]
    122305097
   04031 GTP-binding proteins [BR:cill04031]
    122305097
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     122305097
Ribosome biogenesis [BR:cill03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    122305097
  Pre-60S particles
    122305097
Transfer RNA biogenesis [BR:cill03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    122305097
Chromosome and associated proteins [BR:cill03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     122305097
   Spindle formation proteins
    122305097
Exosome [BR:cill04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122305097
GTP-binding proteins [BR:cill04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    122305097
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_16 AAA_22 AAA_7
Other DBs
NCBI-GeneID: 122305097
NCBI-ProteinID: XP_042973340
LinkDB
Position
3:49840438..49843791
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDSTLHFV
ESPALAPPEVQIDLAAQKQHEDELAAAASQPLPDDDDDTFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctctaccgaatcaacagactgttgactaccctagtttcaagctcgtcatcgtcggt
gatggaggcactgggaaaacaacttttgtgaagagacatttgaccggggagttcgagaag
aaatatgaacctactattggcgtggaggttcacccattggacttcttcactaattgcggg
aagatccggttttactgctgggacactgctggccaagagaaatttggtggtcttagagat
ggatactacattcatgggcaatgtgcaataattatgtttgatgttacagcccggttgaca
tacaagaatgttcctacatggcaccgtgacctctgccgggtttgtgagaatataccaatt
gttctttgtggaaacaaagttgatgtgaagaacaggcaagttaaggcaaagcaggttaca
ttccacaggaagaagaatctgcagtactatgagatatctgcaaagagcaattacaatttt
gagaagcctttcctatatcttgccagaaagcttgctggggactctactctccactttgtg
gagtctcctgctcttgctcctccagaagtacaaattgacttggcggcacagaaacagcat
gaagatgagcttgctgctgcagccagtcagcctcttcctgatgacgatgatgatacattc
gagtga

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