Carya illinoinensis (pecan): 122307828
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Entry
122307828 CDS
T08745
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03420
Nucleotide excision repair
cill04120
Ubiquitin mediated proteolysis
cill04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122307828
04120 Ubiquitin mediated proteolysis
122307828
09124 Replication and repair
03420 Nucleotide excision repair
122307828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122307828
03400 DNA repair and recombination proteins [BR:
cill03400
]
122307828
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
122307828
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122307828
Multi subunit type E3
SCF complex
Ring finger protein
122307828
Cul2 complex
122307828
Cul3 complex
122307828
Cul4 complex
122307828
Cul7 complex
122307828
Cul8 complex
122307828
Cul9 complex
122307828
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122307828
TCR (transcription coupled repair) factors
Cul4-CSA complex
122307828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
122307828
NCBI-ProteinID:
XP_042976865
LinkDB
All DBs
Position
4:30251901..30257341
Genome browser
AA seq
117 aa
AA seq
DB search
MASLDSDVPMVPAGEPSSSAGPSSSKKCKHFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttggactccgacgtgcccatggtcccagccggcgagccttcaagcagcgcc
ggtccttcctcctccaaaaagtgcaagcacttcgagatcaagaagtggaacgccgtcgct
ctctgggcctgggatatcgtggtcgataactgtgccatttgcaggaaccatatcatggat
ctctgtattgagtgccaagctaatcaggctagcgccaccagcgaggaatgtacggttgct
tggggggtttgcaaccatgccttccatttccattgcatcagccgatggctcaaaactcgt
caagtgtgtcctttagataacagcgagtgggagtttcagaagtatggtcactag
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integrated database retrieval system