Carya illinoinensis (pecan): 122307924
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Entry
122307924 CDS
T08745
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00906
Carotenoid biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M01040
Lutein biosynthesis, plants, lycopene => lutein
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122307924
Enzymes [BR:
cill01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
122307924
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GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
Thi4
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
122307924
NCBI-ProteinID:
XP_042976990
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Position
4:complement(32161004..32172695)
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AA seq
532 aa
AA seq
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MECLGLGGARNLAAMTVTFFPLRRSPGIMVSRKQHSFRRFRLYRHFVQVRAAARTGSESC
VAVDFDADEEDYVKAGGSEVLFVQMQQNKPMEMQSKLSDKLPAISVAENVLDLVVIGCGP
AGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWQDTIVYLDDHD
PVLIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVERIVEATNGHSLVACEHNIIVHCR
LATVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDYMKQKVPC
LEAEYPTFLYAMPMSPTRVFFEETCLASKNAMPFGLLKEKLWSRLQTMGIQITKTYEEEW
SYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPNYASVIAKILKQSHSKDA
LTNEQLNANISMQAWNSLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPSWMW
QGFLGSTLSSADLVLFAFYMFVIAPNDLRKCLIRHLLSDPTGAIMIRTYLTI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggagtgccttgggcttggaggagctcggaaccttgccgcaatgacggtgacgtttttc
ccccttcggaggtctcctggaattatggtttcgagaaagcaacattcttttcgccgtttc
cgtttgtaccgacatttcgtgcaagtgagggcggcggcccgcaccgggagcgagagttgc
gtggctgtggatttcgacgccgacgaggaagattatgtaaaggctggtgggtctgaggtt
ctctttgtccaaatgcagcagaacaagcccatggaaatgcagtctaaactctccgacaag
ctaccagctatatcagtagcggagaatgtactggatttggtggtgatcggttgtggtcca
gctgggcttgctctggctgcggagtcagccaagttagggctcaaagttggacttattggt
ccagatctcccttttacaaataattacggcgtgtgggaggatgaatttaaagatcttgga
cttgaaggctgtatcgagcatgtttggcaggataccatcgtatatcttgatgaccatgat
ccagttcttattggtcgtgcctatggacgtgtaagtcgacatttgctccatgaggagttg
ttaagaaggtgtgtcgagtcaggtgtttcatatcttagttccaaagtggaaagaattgtt
gaagctactaatggccacagtcttgtagcctgtgaacacaatattattgttcactgcagg
cttgctactgttgcatcaggagccgcttcgggaaagttgttgcagtatgaggtgggtggt
ccaaaggtgtctgtccaaacggcttatggtgtggaggttgaggtggaaaacaatccatat
gatcccagcctgatggttttcatggactacagggactacatgaaacaaaaggttccatgt
ttagaagcagaatatccaacattcttatatgccatgcccatgtcaccaacaagagtattc
tttgaggaaacttgtctggcttcaaaaaacgccatgccttttggtttgttgaaggaaaaa
ctttggtcaaggttacagacaatggggatccaaattacaaaaacttatgaagaggaatgg
tcctatatcccagttggtggatctttaccaaatacagagcagaagaaccttgcatttggt
gctgctgccagcatggtgcatccagccacgggctattcagttgtgagatctttgtcagaa
gctccaaattatgcttctgtaattgctaagattttgaagcagagccattccaaggatgct
cttactaatgaacagcttaatgccaatatctcaatgcaagcatggaactccctctggcca
caagaaagaaaacgccagagggcattctttctctttggactagcactgattcttcaactg
gatatcgagggcattaggacattctttcgtactttctttcggttacccagttggatgtgg
cagggatttcttggctcgactctctcttcagcagacctcgtattgtttgccttctatatg
tttgtgatagcaccaaacgatttgagaaagtgccttattagacatcttctttctgatccc
acaggagcaatcatgataagaacctatcttacaatatag
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