Carya illinoinensis (pecan): 122314391
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Entry
122314391 CDS
T08745
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122314391
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122314391
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122314391
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
122314391
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122314391
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122314391
Prokaryotic type
Other AARSs
122314391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
122314391
NCBI-ProteinID:
XP_042985871
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Position
1:27015554..27049928
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AA seq
1185 aa
AA seq
DB search
MDEVCEGKDFSFPNYEEKILELWREIKAFETQLERTKDQPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMNGRHVTRRFGWDCHGLPIENEIDRRLDIKKREDVLNLGIDKYNEE
CRSIVTRYVREWEKIVWRTGRWIDFNNGYKTMDLNFMETVWWVFAQLYDKGLVYKGFKVM
PYSTGCKTPLSNFEAGQEYRDVPDPEIMVTFPIIGDPHKAAFVAWTTTPWTLPSNLALCV
NANFVYVKVRNKYSGKVYMVAESRLPALPSEKPKPSIANGSIPDTKKSNPKTKGSSSGKT
GDVVDSYEVLEKVSGASLVGMKYQPLFDYFIECSESAFRVLADNYVTDDSGTGIVHCAPA
FGEDDYRVCSENQIISKGENLIVAVDDDGCFTAKITDFSGQYVKDADKDIIEAVKEKGRL
VKSGSFMHPYPFCPRSKTPLIYRAVPSWFIKVEELKEKLLENNKQTYWVPDFVKEKRFHN
WLENARDWAVSRSRFWGTPLPVWISEDGEEVLVMDSVEKLEKLSGVKVDDLHRHKIDHIT
IPSSRGPEFGVLRRIADVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTR
GWFYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPLEVIDNYGADALRL
YLINSPVVRAEPLRFKKEGVHGVVRDVFLPWYNAYRFLVQNAKRLEVEGFAPFIPIDQAS
LQNSSNVLDQWINSATQSLVYFVRQEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKG
RTGEDDCRTALSTLYNVLLVSCKVMAPFTPFFTEVLYQNLRKVSNGSEESIHYCRFPQEE
GKRGERIEQSVARMTTIIDLARNIRERHNKPLKTPLREMVVVHPDADFLNDIAGKLREYV
LEELNVRSLEPCNDTLKYACLRAEPDFSVLGKRLGKSMGVVAKEVKGMSQEDILAFERAG
EVTIAGHCLKLTDIKVIRDFKCPDGFTDKEIDATGDGDVLVILDLRADISLFEAGVAREI
VNRIQKLRKKAALEPTDIVEVYFKSLDEDKSLSERVLSSQDSYIADAIGSQLLPSTMMPS
QAIIIGEETFHGISGMSFVISLTRPALVFNLDAILASYAGNMKFAQGLQTYLLSRDHSVL
KSEFQLGNGKITVSCIENLPPVDLFLGEHLFLTVGDYVSSTKKSE
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtttgcgaagggaaggatttctcctttccaaactacgaggagaagatcctt
gagttgtggagggagataaaggcattcgaaacccagctggagcgcaccaaggaccagccc
gagtacatcttttatgacgggcctcccttcgcaacggggctcccacactatggccacatc
ctcgccggtaccatcaaggacatcgtcacccgctaccagtccatgaacggccgccacgtc
actcgccgcttcggctgggattgccacggccttccaatcgagaacgagatcgaccgtcgc
ctcgacattaagaagcgcgaagatgtgttgaacttggggatcgataagtacaacgaggag
tgccgtagcattgtcacgaggtatgtgcgggagtgggagaagattgtttggcggactggg
cggtggattgatttcaataatggttacaagactatggacttgaacttcatggagactgtg
tggtgggtctttgctcagctttatgacaagggtcttgtgtataaaggtttcaaggtcatg
ccatacagcactggttgtaagacacctctatctaattttgaagccggtcaggaatatcgg
gatgtgcctgaccctgaaattatggtgacttttccaataattggtgatccgcataaggca
gcctttgtggcttggacaacaactccgtggacccttccgagtaatcttgccctttgtgtc
aatgcaaattttgtctatgttaaggttcgcaacaagtactctggaaaagtatatatggtt
gctgaatctcgtttgccagctcttcctagtgagaagccaaaaccaagtatagctaatgga
tctattcctgacaccaaaaaatcaaatcccaagaccaagggatcctcaagtggtaaaact
ggagatgtggtggattcatatgaagttttggagaaagtttcaggggcttcattggtggga
atgaagtatcaaccattgtttgattattttatcgagtgctctgagtctgcatttagagtt
cttgccgacaattatgttacagatgatagtggtactgggattgtgcattgtgcgcctgct
tttggtgaagatgattaccgtgtttgcagtgagaatcaaatcataagcaagggagagaac
ttaattgtagcagttgatgatgatggctgctttacggcaaagattaccgactttagcggg
cagtatgtcaaggatgcagataaggatattattgaagcagttaaggaaaaaggccgcctg
gttaagtctgggagctttatgcatccttatcccttctgtccaagatccaaaactcctctt
atttatcgagctgttccaagctggttcattaaagtagaagagttgaaagagaaattgcta
gaaaacaacaagcagacctactgggttcctgattttgtgaaggaaaagcgattccacaat
tggctggaaaatgcgagagattgggctgttagtcgaagtaggttttggggtactcctctt
cctgtatggattagtgaggatggtgaagaagtacttgtcatggattccgttgagaaactt
gaaaagctttctggtgttaaggtggatgatctgcatcgtcataagattgatcatattaca
attccctctagtcgcggccctgaatttggtgtccttcgacgcatagctgatgtgtttgat
tgttggtttgagagtgggtccatgccttatgcttatatccattatccatttgagaatgtt
gaactctttgagaaaaactttcctgggcactttgtggctgaagggcttgatcaaacgcgt
ggatggttttatactctcatggtgttgtctactgcattatttggaaagcctgcatttagg
aatctcatttgtaatggacttgtcctggcggaggatggaaagaagatgagtaaaagtctg
aaaaactatccttcacctttggaagtcattgataattatggagctgatgcattacgattg
tacctcataaactccccagtggtgcgcgcagagcccttgcgtttcaaaaaggaaggagtt
catggtgttgtcagggatgtttttcttccctggtacaatgcatatagattccttgttcag
aatgctaaaagacttgaagttgagggatttgcaccattcatacccattgatcaagcctct
ctccaaaattcatctaatgtgcttgaccagtggatcaactcagctacacagagtcttgtt
tattttgtccgccaagagatggatggttatcgcctttacacggtggttccatatctcttg
aagtttcttgacaacttgacaaacatatacgtacggttcaaccgtaagagacttaaaggt
cgtactggagaagacgactgtaggacagcactctcaactctttacaatgtccttctggtg
tcatgtaaagtaatggcaccatttactccattttttactgaagttctgtatcaaaatctt
cgaaaagtttccaatgggtcagaggaaagcattcattattgccggtttcctcaagaagaa
gggaagaggggggaacgaattgaacaaagtgttgcaaggatgacaactattattgatctt
gcccgcaacattcgtgagcggcacaacaaacctcttaaaacaccactaagggaaatggta
gtagttcatcctgatgcagactttctcaatgatatagctggaaagttaagagagtatgtg
ctagaggaactcaatgtacgttctcttgagccatgcaatgataccttgaaatatgcttgt
ttacgtgcagaacctgattttagtgtgttaggtaagcggcttggaaaatctatgggagtc
gttgctaaggaagtcaaaggaatgtcacaggaagatattttagcttttgagagagctggc
gaagttactattgcaggtcattgtttgaagctgactgatattaaggttattcgggatttc
aaatgtcctgatggatttacagataaggagattgatgcaacaggagatggtgatgttttg
gtgattttggatttgcgtgcggatatctcattgtttgaggctggtgttgctcgtgagatt
gtgaatagaattcagaagttacggaagaaagctgccctagaacctactgacattgtggag
gtttacttcaaatcgttggatgaagataaatcactctcagaacgagttttgagttcccaa
gattcatacattgcagatgccattggctcccaattgcttccttctactatgatgccatca
caggcaatcattattggtgaggagactttccatgggatctcgggcatgtcatttgttatc
agcttaacaagacctgcgctagtgttcaatctagacgccattcttgcatcatatgcagga
aatatgaagtttgctcaaggtctgcagacttacttgctatcaagggatcattcagttttg
aagtcggagtttcaacttgggaatgggaagataacggtcagttgcattgaaaatttgcct
ccggttgatttgtttttgggggaacaccttttcttgacagttggcgattatgtttcttcc
acaaaaaaatctgagtga
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