Carya illinoinensis (pecan): 122318813
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Entry
122318813 CDS
T08745
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122318813
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122318813
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122318813
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
122318813
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122318813
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122318813
Prokaryotic type
Other AARSs
122318813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
122318813
NCBI-ProteinID:
XP_042992390
LinkDB
All DBs
Position
1:40258232..40273734
Genome browser
AA seq
1100 aa
AA seq
DB search
MNEANMSLFKSFATNSSALKHGEATMSLMQTSPYMVLSRSTCTSLRKTTSVGLSNFRGST
SVKVLSLLNVTRHHTCSSGEFCSSSKRRSRGPVMAAKKASEGAKQEDGKYKHTVDLPKTT
FGMRANSLVREPEIQKIWVDRQVYKRIMDRNNGEKFILHDGPPYANGDLHMGHALNKILK
DIINRYKLLQNYKAHYVPGWDCHGLPIELKVLQSLDQDARKDLTPLKLRAKAAKFAKQTV
QKQMASFKRFGVWADWNNPYLTLDPEYEAGQIEVFGQMAIHGYIYRGRKPVHWSPSSRTA
LAEAELEYPEGHVSRSIYAIFRIVDAPLTSSGLLKEFFPNLCLAIWTTTPWTIPANAAVA
VNAKLQYAIVELQSHSEDVSVSAGNKKQRLGSLLKESKKPFLIVASDLVLPLEAKWGMKL
VIKKTLLGSDLENCRYIHPIDNRECPVVVGGDYITTEAGTGLVHTAPGHGQEDYVTGLKY
GLPVLSPVDDDGKFTEEAGRFSGLDVLGDGNVAVAKYLDERLSIIMEESYEHKYPYDWRT
KKPTIFRATEQWFASVEGFRQAAMSAIGDVKWIPPQSENRISAMTSSRSDWCISRQRTWG
VPIPVFYHIQSKEPLMNEETINHIKTIIAQKGSDAWWYMKVEDLLPEKYREKASDYEKGT
DTMDVWFDSGSSWAAALGKKDGLRFPADLYLEGTDQHRGWFQSSLLTSVATKGRAPYTSV
ITHGFVLDEKGLKMSKSLGNVVDPHTVIEGGKNPKEAPSYGADVLRLWVSSIDYTGDAMI
GPQVLRQMSDIYRKLRGTLRYLLANLHDWRADYAVSYHNLPIIDRHALFQLENFQMNIKE
SYEKYQFFKIFQIMQRFVIVDLSNFYFDVAKDRLYVGGTASFTRRSCQTVLAAHLLSIVR
VLAPILPHLAEDVWQNLPFQYNMEDGSVAEFVFESRWPTPNETWLAFPTKEIDFWAKVLE
LRTEVNRVLEVARTEKLIGSSLDAKVYLQASDASLASRLCEMCSAKDDADTLQRIFITSQ
AEVLPSLEDELISHIPFKGECLIQGQSKVWIGVSRAEGSKCERCWNFSPQVGSFPEHPTL
CSRCYNVVGVQPLSAVAVTS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagccaacatgtccctcttcaaatccttcgccacaaactcctctgcactgaaa
cacggggaagccaccatgtctttgatgcaaacctctccgtatatggttttatcacgaagc
acttgcacatctcttaggaaaaccacttctgttggcttatctaatttcagaggaagcact
tcggtcaaagtcttgtctctcttaaatgttacacgccatcatacttgttccagtggtgaa
ttctgttcttcctcgaagaggagatctcgaggaccggttatggcagcaaagaaagcatct
gaaggggcaaaacaggaagatggaaaatacaaacacacagttgatcttccgaagacaaca
tttggcatgagagcaaattcgttggtcagggagcctgaaattcagaaaatatgggttgac
aggcaggtgtacaagagaattatggatagaaataatggggaaaaatttattctgcatgat
ggtcctccatatgcaaatggcgatcttcacatggggcatgctctaaataagattttgaaa
gatataatcaaccgttacaagctccttcaaaactacaaagctcattatgtgcctggctgg
gattgtcatgggctacctattgagttgaaagttctacagtcactggatcaagatgcccga
aaagatctcacaccattaaagttgagagcaaaggccgccaaatttgccaaacaaaccgtt
caaaaacagatggcatcgtttaagcggtttggagtatgggcagactggaataatccctat
ctaactcttgatccagaatatgaagctggccagattgaagtgtttggccagatggccatt
catgggtatatctacagaggcaggaaaccagttcactggagcccctcatcgcgaactgct
cttgcagaggcggagttggagtatcctgaagggcatgtttctagaagcatatatgccatt
ttcagaatagtggatgcacctctaacttcaagtggcttattaaaagagtttttccccaat
ttgtgcttggcaatatggactacaactccctggactattccggccaatgctgcggttgca
gtgaatgccaagcttcaatatgccatagttgaactacagtcacattcagaagatgtttct
gtttctgctggaaacaaaaaacaaaggcttgggagtcttcttaaggaatcaaagaagcct
tttcttattgttgcatcagatcttgtgctgccattagaagcaaaatggggaatgaaactt
gtcattaagaaaacactattaggttcagatctcgagaactgcaggtatatccatccaata
gataacagagaatgtccggtagttgttggaggagattatattacaacggaagcaggaact
ggactggtccatactgctcctggacatggtcaggaggattatgtgactggcctgaagtat
ggactgcctgtactttctcccgtagatgatgatggaaagtttactgaagaagctggacgg
tttagtgggcttgatgtacttggtgatggtaatgttgccgttgcgaaatacttggatgaa
cgtttgtcaattattatggaagaatcatatgagcacaagtatccttatgactggcgaaca
aagaagcctacaatatttagggcaacagagcagtggtttgcatcagttgaaggatttcgc
caggctgctatgagtgcaattggtgatgtaaaatggattccccctcagtcagaaaacaga
atttctgcaatgacttctagccggtctgactggtgtatatcacgacagaggacatgggga
gtgcccattccagtcttttatcatattcagtcaaaggaacctcttatgaatgaagagact
attaaccacatcaagactataatagcccaaaaaggtagtgatgcatggtggtacatgaag
gtagaggatcttcttcctgaaaaatatcgggaaaaagcgtcagattatgaaaaggggact
gacactatggatgtctggtttgactcaggctcttcttgggctgcagccttgggtaaaaaa
gatgggcttcgttttcctgcagacttgtaccttgaaggtactgatcagcatcgtgggtgg
ttccaaagttccctgttaacaagtgttgccacaaaaggaagggctccatacaccagtgtc
ataacgcatgggtttgtactggatgagaaaggtttaaagatgagcaaatctttgggtaat
gttgtggatccacatactgtgattgaaggaggaaaaaacccaaaggaagcacctagttat
ggagctgatgtcttgcgactttgggtttctagtattgattatacaggtgatgctatgatc
ggccctcaagtcctccgtcaaatgtctgatatttataggaagctgcgtggaacattgaga
taccttttggcgaatctgcatgactggagagctgattatgctgtttcataccacaatctt
cctatcattgatcggcacgcgctatttcagcttgaaaattttcaaatgaacattaaggag
agctatgaaaaatatcagttctttaaaatattccagatcatgcaacggtttgtcattgtt
gacctatcaaatttctattttgatgtggcaaaagatcggctttatgttgggggcactgca
agttttactagaagaagttgtcaaacagttcttgcagcacatctgctttccattgtgaga
gtacttgctcccatattgccccatttggcggaggatgtatggcaaaaccttccctttcag
tataacatggaagatggttctgttgctgaatttgtttttgaatcaagatggccaaccccg
aatgaaacatggcttgcttttcctaccaaagaaattgacttctgggcaaaagttctcgag
ctgagaactgaggtgaatagagtcctggaagttgctcgtaccgagaaattgattggttcc
agtttagatgcaaaagtttatctccaggcttctgatgctagcctggcatcgagattgtgt
gagatgtgttcagcaaaagacgatgcagacacattgcagcgcatattcataacatctcag
gcagaggttcttccctccttagaggatgagcttatttctcacataccattcaaaggagag
tgtctcattcaagggcagagcaaggtttggattggcgtttctcgtgccgagggctcaaaa
tgtgaaagatgctggaatttttcacctcaagttggttcttttccagagcaccccaccctt
tgtagccgctgttataatgttgttggcgttcaaccactttcagctgtagcagtgacgagc
tga
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