KEGG   Coccidioides immitis: CIMG_02622
Entry
CIMG_02622        CDS       T01114                                 
Name
(RefSeq) ABC transporter
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
cim  Coccidioides immitis
Pathway
cim03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CIMG_02622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cim03019]
    CIMG_02622
Messenger RNA biogenesis [BR:cim03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CIMG_02622
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_25 AAA_15 AAA_23 RsgA_GTPase AAA_28 MMR_HSR1 AAA_22 ORC-CDC6-like PduV-EutP DUF3584 Dynamin_N AAA_13
Other DBs
NCBI-GeneID: 4565398
NCBI-ProteinID: XP_001248851
UniProt: A0A0E1RZ96
LinkDB
AA seq 270 aa
MASATPDSSVHVHDLNYSFPDGTAGLTNINLDLPLGSRTLLIGANGAGKSTLLRLLSGKR
LAPANTITVGGVDPFKEGLEGVTYLGVEWVLNPIVRTDIDVPTLLASVGGDHYPERRDEL
VEILDVDLSWHMHAVSDGERRRVQLAMGLLRPWNLLLLDEITVDLDLLSRANFLAFLRRE
TEIRPCTILYATHILDNLANWPTHLVHMHMGQVRDWGAIEKFYAGKPRVSENSQLGELVL
EWLKKDLKERGPRPGRPSESKVEPGYNMEI
NT seq 813 nt   +upstreamnt  +downstreamnt
atggcgtcagccactccggattcatccgttcacgttcacgacctcaactacagctttccc
gacggcacagctggtcttacaaacatcaatcttgacctccctctgggaagccgtaccttg
ctaattggagcgaatggtgcgggcaaaagcactctcctccgtctcctctcaggaaaacgt
ctcgctccagctaataccataactgtcggtggtgtcgatccttttaaggaggggcttgaa
ggcgtcacatatctcggggtggaatgggtcctgaaccctatcgtccgcacagacattgat
gttcccaccctcctcgcctccgtcggaggcgaccactaccctgaacgtcgcgatgaattg
gtcgagattctcgacgtagatctatcatggcatatgcacgctgtttctgacggtgaacgg
cgccgtgttcagctcgccatgggtctactgcggccatggaatctgctcctgctggatgaa
attactgttgatctagacctactcagtcgggccaatttcctggcatttttgcgaagggag
acggaaatccgaccgtgcactatcttgtatgccactcacatcttggataaccttgcaaat
tggcccactcatcttgtgcacatgcatatgggccaagtacgagactggggtgctattgaa
aagttttacgccggaaaaccaagagtgtctgagaatagtcaacttggtgagttggttcta
gaatggctgaagaaggatttaaaagaaagagggccgcgacccggaaggccgagtgagagt
aaagtggaaccaggatataacatggaaatatag

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