Cebus imitator (Panamanian white-faced capuchin): 108286284
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Entry
108286284 CDS
T08783
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03015
mRNA surveillance pathway
cimi05014
Amyotrophic lateral sclerosis
cimi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108286284
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108286284
05022 Pathways of neurodegeneration - multiple diseases
108286284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108286284
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
108286284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
TDP43_N
RRM_1
RRM_7
RRM_3
RL
DUF4651
Motif
Other DBs
NCBI-GeneID:
108286284
NCBI-ProteinID:
XP_017359442
Ensembl:
ENSCCAG00000025859
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSADEPLRSRKVFVGRCTEDMTEDELRQFFSQYGEVMDVFIPKPFRAFAFVTFADDQIA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGNMQ
REPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatatattcgggtaaccgaagatgagaacgatgagcccattgaaataccatcg
gaagatgatgggaccgtgctgctgtccacggttacagcccagtttccaggggcttgtggg
cttcgctacaggaatccagtgtctcaatgtatgagaggtgtccggctggtggaaggaatt
ctgcatgcccccgatgctggctggggaaatctggtgtatgttgtcaactatcccaaagat
aacaaaagaaaaatggatgagacagatgcttcatcagcagtgaaagtgaaaagagcagtc
cagaaaacttccgatttaatagtgttgggtctcccatggaaaacaactgaacaggacctg
aaagactattttagtacctttggagaagttcttatggtgcaggtcaagaaagatcttaag
actggtcattcaaaggggtttggatttgttcgttttacggaatatgaaacacaggtgaaa
gtaatgtcacagcggcatatgatagacggacggtggtgtgactgtaaacttcctaattct
aagcaaagtgcagatgagcctttgagaagcagaaaagtgtttgtggggcgctgtacagag
gacatgactgaggatgagctgcggcagttcttctcccagtacggggaggtgatggatgtc
ttcatccccaagccgttcagggcctttgcctttgttacatttgcagatgatcagattgcg
cagtctctttgtggagaggacttgatcattaaaggaatcagcgttcatatatccaatgcc
gaacctaagcacaatagcaatagacagttagaaagaagtggaagatttggtggtaatcca
ggtggctttgggaatcagggtggatttggtaatagtagagggggtggagctggtttggga
aacaatcaaggtagtaatatgggtggtgggatgaactttggcgcgttcagcattaatcca
gccatgatggctgcagcccaggcagcgctacagagcagttggggtatgatgggcatgtta
gccagccagcagaaccagtcaggcccatcgggtaataaccaaagccaaggcaacatgcag
agggagccaaaccaggccttcggttctggaaataactcttatagtggttctaattctggt
gcagcaattggttggggatcagcatcaaatgcagggtcgggcagtggttttaatggaggc
tttggctcgagcatggattctaagtcttctggctggggaatgtag
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