KEGG   Cebus imitator (Panamanian white-faced capuchin): 108297705
Entry
108297705         CDS       T08783                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
cimi  Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03018  RNA degradation
cimi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cimi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108297705
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108297705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cimi03019]
    108297705
   03041 Spliceosome [BR:cimi03041]
    108297705
Messenger RNA biogenesis [BR:cimi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108297705
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108297705
Spliceosome [BR:cimi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    108297705
 Complex C
  U2 snRNP components
    108297705
SSDB
Motif
Pfam: LSM TIG_SUH vATP-synt_E RimP_C
Other DBs
NCBI-GeneID: 108297705
NCBI-ProteinID: XP_037591465
Ensembl: ENSCCAG00000031469
LinkDB
Position
Unknown
AA seq 102 aa
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRQLRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq 309 nt   +upstreamnt  +downstreamnt
atggcggacgacgtagaccagcaacaaactaccaacactgtagaggagcccctggatctt
atcaggctcagcctagatgagcgaatttatgtgaaaatgagaaatgaccgacagcttcga
ggcagattacacgcttacgatcaacatttaaatatgatcttaggagatgtagaagaaact
gtgactactatagaaattgatgaagaaacatatgaagagatatataaatcaacgaaacga
aatattccaatgctgtttgtccggggagatggcgttgtactggttgcccctccgctgaga
gttggctga

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