KEGG   Cebus imitator (Panamanian white-faced capuchin): 108305750
Entry
108305750         CDS       T08783                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
cimi  Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04010  MAPK signaling pathway
cimi04064  NF-kappa B signaling pathway
cimi04120  Ubiquitin mediated proteolysis
cimi04140  Autophagy - animal
cimi04144  Endocytosis
cimi04380  Osteoclast differentiation
cimi04620  Toll-like receptor signaling pathway
cimi04621  NOD-like receptor signaling pathway
cimi04622  RIG-I-like receptor signaling pathway
cimi04657  IL-17 signaling pathway
cimi04722  Neurotrophin signaling pathway
cimi04936  Alcoholic liver disease
cimi05132  Salmonella infection
cimi05133  Pertussis
cimi05135  Yersinia infection
cimi05140  Leishmaniasis
cimi05142  Chagas disease
cimi05145  Toxoplasmosis
cimi05152  Tuberculosis
cimi05160  Hepatitis C
cimi05161  Hepatitis B
cimi05162  Measles
cimi05168  Herpes simplex virus 1 infection
cimi05169  Epstein-Barr virus infection
cimi05170  Human immunodeficiency virus 1 infection
cimi05171  Coronavirus disease - COVID-19
cimi05200  Pathways in cancer
cimi05222  Small cell lung cancer
cimi05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
cimi05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cimi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108305750 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108305750 (TRAF6)
   04064 NF-kappa B signaling pathway
    108305750 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108305750 (TRAF6)
   04140 Autophagy - animal
    108305750 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108305750 (TRAF6)
   04621 NOD-like receptor signaling pathway
    108305750 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    108305750 (TRAF6)
   04657 IL-17 signaling pathway
    108305750 (TRAF6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    108305750 (TRAF6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    108305750 (TRAF6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    108305750 (TRAF6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    108305750 (TRAF6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    108305750 (TRAF6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    108305750 (TRAF6)
   05161 Hepatitis B
    108305750 (TRAF6)
   05160 Hepatitis C
    108305750 (TRAF6)
   05171 Coronavirus disease - COVID-19
    108305750 (TRAF6)
   05162 Measles
    108305750 (TRAF6)
   05168 Herpes simplex virus 1 infection
    108305750 (TRAF6)
   05169 Epstein-Barr virus infection
    108305750 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108305750 (TRAF6)
   05135 Yersinia infection
    108305750 (TRAF6)
   05133 Pertussis
    108305750 (TRAF6)
   05152 Tuberculosis
    108305750 (TRAF6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    108305750 (TRAF6)
   05140 Leishmaniasis
    108305750 (TRAF6)
   05142 Chagas disease
    108305750 (TRAF6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    108305750 (TRAF6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    108305750 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cimi04131]
    108305750 (TRAF6)
   04121 Ubiquitin system [BR:cimi04121]
    108305750 (TRAF6)
Enzymes [BR:cimi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108305750 (TRAF6)
Membrane trafficking [BR:cimi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    108305750 (TRAF6)
Ubiquitin system [BR:cimi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    108305750 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX TRAF3_RING RING_XB3-XBAT31 U-box zf-RING_11 DUF16 Med21 PspA_IM30 Spc29 UPF0242 DUF7310 DUF6271 DUF1664 DM
Other DBs
NCBI-GeneID: 108305750
NCBI-ProteinID: XP_017385979
Ensembl: ENSCCAG00000009055
LinkDB
Position
Unknown
AA seq 537 aa
MDKFFSRASDNQVTMSLLNCENSCGSSHSESDCCGAMASSCSAATKDDSVGGTASTGNLS
SSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP
VDNEILLENQLFPDNFAKREILSLMVRCPNEGCLHKMELRHLEDHQVHCEFALMDCPQCQ
HPFQKCQINIHILKDCPRRQVSCVNCAASMAFEDKEIHDQNCPLANVVCEYCNTVLIREQ
MPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLTLTP
APPTPEVWNFQETIHQLEGRLVRQDHQIRELTAKMETQGMYVNELRRTIRTLEDKVAEIE
AQQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCAN
YISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIP
RNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDTGA
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggataagttctttagtagagcaagtgataatcaagttactatgagtctactaaattgt
gaaaacagctgtggatccagccactctgaaagtgactgctgtggggccatggccagctcc
tgtagcgctgcaacaaaagatgatagtgtgggtggaactgccagcacggggaacctctcc
agctcctttatggaggagatccagggatatgatgtggagtttgacccacccctggaaagc
aagtatgaatgccccatctgcttgatggcattacgagaagcagtgcaaacaccatgcggc
cataggttctgcaaagcctgcatcataaaatcaataagggatgcaggtcacaaatgtcca
gttgacaatgaaatactgctggaaaatcaactatttccagacaattttgcaaaacgtgag
attctttctctgatggtgaggtgtccaaatgaaggttgtttgcacaagatggaactgagg
catcttgaggatcatcaagtacattgtgagtttgctcttatggattgtccccaatgccag
catcctttccaaaaatgccaaattaatattcacattctgaaggattgtccaaggagacag
gtttcttgtgtaaactgtgctgcatcaatggcatttgaagataaagagatccatgaccag
aactgtcctttggcaaatgtcgtctgtgaatactgcaataccgtactcatcagagaacag
atgcctaatcattatgatctagactgccctacagccccaattccatgcacgttcagtact
ttcggttgccatgaaaagatgcagaggaatcacttggcacgccacctacaggagaacacc
cagtcacacatgagaatgttggcccaggctgttcatagtttgagccttactttaactccc
gctcctcccacccctgaggtctggaatttccaggaaactattcaccagttagagggtcgc
cttgtaagacaagaccatcaaatccgggagctgactgctaaaatggaaactcagggtatg
tatgtaaatgagctcaggcgaaccattcgaacccttgaggacaaagttgctgaaattgaa
gcacagcagtgcaatggaatttacatttggaagattggcaactttggaatgcatctgaaa
tgtcaagaagaggagaaacctgttgtgattcacagccctggattctacacaggcaaaccc
gggtataaactgtgcatgcgcttgcaccttcagttaccgactgctcagcgctgtgcgaac
tatatatccctttttgtccacacaatgcaaggagagtatgacagccacctcccttggccc
ttccagggtacaatacgccttacaattcttgatcagtctgaagcacctgtaagacaaaac
cacgaagagataatggatgccaaaccagagctgcttgctttccaacgacccacaatccca
cggaacccaaaaggttttggctatgtaacttttatgcatttggaagccctaagacaaaga
actttcattaaggatgacacattattagtgcgctgtgaggtctccacccgctttgacatg
ggtagccttcggagggagggttttcagccacgaagtactgatacaggagcatag

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