Cebus imitator (Panamanian white-faced capuchin): 108313298
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Entry
108313298 CDS
T08783
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108313298 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108313298 (SMG6)
03032 DNA replication proteins [BR:
cimi03032
]
108313298 (SMG6)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108313298 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
108313298 (SMG6)
DNA replication proteins [BR:
cimi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
108313298 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
MCD_N
Motif
Other DBs
NCBI-GeneID:
108313298
NCBI-ProteinID:
XP_017397118
Ensembl:
ENSCCAG00000035801
UniProt:
A0A2K5S5Y0
LinkDB
All DBs
Position
Unknown
AA seq
1419 aa
AA seq
DB search
MAEGLERVRISASELRGILATLAPQAGSRENMKELKEPRQRKDNRRPDLEIYKPGLSRLR
NKPKIKETSGSEEFKDEIVNDRDSSAVGNGTQPIKDVCKEPNNQPQKGPIDPENDRGQES
FPRAAGQEDRSLKIIKRTKKPDLQIYQPGRRLQTVSKESASRGEEEEILNQVEQLRVEED
ECRGNVVKEEGVNKPDRAEIEKSPGGDRVRAAKGEKGKRIEKGEGMKKTSDDPAPGKPGS
AKRYSRSDKRRNRYRTCSTSSAGSNNSAEGAGLTDSGCRRRRQDRTKERPRLKKQVSVSS
TDSLDEDRIDEPDGLGPRRNSERKKHLERNWSGRGEGEQKSNGKENRGTLRVTFDAETMN
KESPVVRPARDDTDRGNPDKGLSSGGKGSEKQESKNLKQELRGRGRGILILPAHTTLSVN
SAGSPEATPLGPRLLFGSGSKGPRSWGRGGTTRRLWDPNNPDQKPALKTQTPQLHFLDTD
DEVSPTSWADSRQAQASYYKFQNSDNPYYYPRTPGPASQYPYAGYNPLQYPVGPTNGVYP
GPYYPGYPTPSGQYVCSPLPAGTMSPEEVEQHMRNMQQQELHRLLRVADSQELQLSNLLS
RDRISPEGLEKMAQLRAELLQLYERCILLDIEFSDTQNVDQILWKNAFYQVIEKFRQLVK
DSNVENPEQIRNRLLELLDEGSDFFDSLLQKLQVTYKFKLEDYMDGLAIRSKPLRKTVKY
ALISAQRCMICQGDIARYREQASDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTR
RKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFELNSDQWRKGKK
STFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGSLSPSDLNKRFILSFLHAH
GKLFTRIGMETFPAVAEKVLREFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFS
EECRSVIQEQAAALGLAMFSLLVRRCTHLLKESAKAQLSSSEDQDDQDDIKVSSFVPDLK
ELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLADFCNILTAVNQSEVPLYK
DPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCG
QEEPLLAFKGGKYVSVAPVPDTMGKEMGSQEGKQLEDEEEDVVIEDFEDDSEAEGSGGED
DIRELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMRQMELEIRPLFLVPDTNGFIDHLA
SLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLEQRFES
RDSCLRALTSRGNELESIAFRSEDITGQLGNNDDLILSCCLHYCKDKAKDFMPTRKEEPI
RLLREVVLLTDDRNLRVKALTRNVPVRDIPAFLTWAQVG
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagggctggagcgtgtgcggatctccgcgtcggagctgcgcgggatcctggct
actctggccccgcaggccgggagcagagaaaacatgaaggaactaaaggagcccaggcag
cgcaaagataataggcgtccagatctggaaatctataaacctggtctttctcggctaagg
aataagcccaaaatcaaggaaacctctgggagtgaagaattcaaggatgaaattgttaat
gaccgagattcctctgctgttggaaatggtacacaacccattaaagatgtctgcaaggaa
cccaacaaccaaccgcagaagggtcctatagacccagaaaatgatcggggacaggaatcc
tttcctagggctgctggacaagaggatcgtagtctaaaaattatcaaaagaacaaagaaa
ccagacctgcagatctatcagcctggacggcgtttgcagactgttagcaaagaatcagcc
agtcggggggaggaggaagaaatcctcaaccaggtagaacaactgagagtggaggaagat
gagtgtaggggaaatgttgtgaaagaggaaggtgtgaataaaccagacagggccgaaata
gaaaagagcccaggaggtgacagagtaagggctgcaaagggagaaaaaggaaagaggatt
gagaaaggggaggggatgaagaaaacgagcgatgacccggccccggggaagccaggttct
gcaaagcgctactcccgctcagacaaacgaaggaatcgttaccgcacttgcagtaccagc
tctgctggtagcaacaacagcgctgagggagctggcctcactgatagcggatgtcgccgc
cgccggcaggataggaccaaggagaggccacgactgaagaagcaagtatctgtgtcctca
accgattccttagatgaggacagaattgatgaacctgatggattaggacccaggagaaat
tcagaaaggaagaaacatttagaaagaaactggtctggccgcggggagggtgagcagaaa
agcaatggtaaagaaaatcgaggcactcttcgtgtcacttttgatgcagaaaccatgaac
aaagagtctcccgtggtgaggccagccagggatgatacagatagaggaaaccctgacaaa
ggcttaagcagcgggggcaaaggctctgagaagcaggagtccaaaaacctgaaacaggaa
cttcggggtcgtggtcgtggcattctgattctgcctgcccataccaccctgtctgtcaat
tcagcaggttctccagaggccacacctttgggacctcggcttttgttcggatctggtagt
aagggtcctcggagttggggccgtggaggcaccacacgccgattatgggacccaaataat
cctgatcagaaacctgctctaaagactcagacgccccagctgcatttcttggacactgat
gatgaagtcagccctacatcttgggctgactcacgccaggctcaagcatcttactataaa
tttcaaaactctgacaacccctattattacccgcggacaccaggccctgcctcccagtat
ccctatgcgggctataaccctctacagtacccagtgggccctacaaatggtgtgtaccca
gggccttattacccgggctacccgactccttcaggacagtatgtgtgtagccctcttcct
gccggcaccatgagtcctgaggaggtagagcagcacatgaggaacatgcagcagcaggag
ctgcacaggctcctccgggtggccgacagccaggagctgcagctcagtaacctgctctcc
agggaccgcatcagtccagagggcctggagaagatggcacaactcagagctgaactgctg
cagctgtatgaacgctgtattctactggatatcgagttctctgatactcagaatgtggat
cagatcctgtggaagaatgctttctatcaggtgattgagaagttcaggcagcttgtcaag
gattcgaatgttgagaacccagaacagattcggaacagacttttggagctcttggatgag
ggtagtgacttcttcgatagtttgcttcagaagctgcaggttacttacaagttcaaactg
gaagactacatggatggtcttgccattcgcagtaagccattacgcaagacagtaaaatat
gccttgatcagtgcccagcggtgtatgatatgccaaggagatattgccaggtaccgggag
caagccagtgatacagccaactacgggaaagcacgcagttggtacctgaaggcccagcac
attgctcccaagaatgggcgcccctataaccagttggctttgctggcagtgtatacgagg
aggaagcttgatgctgtatattactatatgcgcagtttagctgccagcaaccctatcctg
actgccaaggaaagtctcatgagcttgtttgaagagaccaagcgaaaggcagaacagatg
gaaaagaagcaacatgaggaatttgagctcaactctgaccaatggcggaaaggaaagaag
tctactttccggcatgttggagatgacaccactcgcctggagatctggattcatccatca
catccacggtcttcccagggcactgagtctgggaaggattctgagcaagagaatgggctg
gggagcctgagtcccagtgatctgaacaaaaggttcatcctcagttttctccatgcccat
gggaagctgtttacccggattgggatggagacgttccctgcagtggctgagaaggtcctc
agggagttccaggtgctgctgcagcacagtccctctcccattggaagtacccgcatgcta
cagcttatgaccatcaatatgtttgctgtacacaactcccagctgaaagactgcttctcg
gaggagtgccgctctgtgatccaggaacaagctgcagctctgggcttggccatgttttct
ctactggtccggcgctgtacccacttacttaaggagtctgccaaagctcagctgtcctct
tctgaggaccaggatgaccaagacgacatcaaggtgtcttccttcgtcccggacctgaag
gagctgctccccagtgtgaaagtctggtcagactggatgctcggctacccggacacctgg
aatcctcctcccacatccctggacctgccctcgcatgttgctgtggatgtgtggtcgacg
ctggctgatttctgtaacatactgactgcagtgaatcagtctgaggtgccactgtacaag
gacccggatgatgacctcacccttcttatcctggaagaggatcggcttctctcgggcttt
gtccccttgctggctgcccctcaggacccctgctacgtggagaaaacctcggacaaggtt
attgcagctgactgcaaaagggtcacagtgctgaagtattttctggaagccctttgtgga
caagaagagcctctgctggcattcaagggtggaaaatatgtgtcagtggcacccgtccca
gacaccatgggaaaggaaatgggaagccaagagggaaaacaactggaagatgaggaggag
gatgtggtgattgaagactttgaggacgattcagaggctgaaggtagcgggggcgaggat
gacatcagggaacttcgggccaagaagctggctctggccaggaagatagctgagcagcag
cgtcgccaagaaaagatccaggctgtcctggaggaccacagtcagatgaggcagatggag
ctcgaaatcagacctttgttcctggtaccagacaccaacggcttcattgatcacctggcc
agtctggcacggctgctggagagcaggaagtacatcctggtggtacccctcatcgtgatc
aatgagctggacggcctggccaaggggcaggagacagaccaccgggctgggggctacgcc
cgtgtggtacaagaaaaggcccgcaagtccatcgagttcctcgagcagcgattcgagagt
cgggactcctgcctacgagccctgaccagccgtggcaatgaacttgaatccatcgccttc
cgcagtgaggacatcactggccagctgggtaacaacgatgatctcatcctctcctgctgc
ctccactactgcaaagacaaggctaaggacttcatgcccaccagaaaagaggagcccatc
cggctgctgcgggaggtggtgctgttgacggatgaccggaacctgcgtgtgaaggcgctc
acaaggaatgtacctgtacgggacatcccagccttcctcacatgggcccaggtgggctga
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integrated database retrieval system
