Ciona intestinalis (yellow sea squirt): 100175295
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Entry
100175295 CDS
T01056
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase 1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00280
Valine, leucine and isoleucine degradation
cin00650
Butanoate metabolism
cin00900
Terpenoid backbone biosynthesis
cin01100
Metabolic pathways
Module
cin_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
100175295
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100175295
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100175295
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
100175295
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Motif
Other DBs
NCBI-GeneID:
100175295
NCBI-ProteinID:
XP_026690482
Ensembl:
ENSCING00000007042
UniProt:
F6ZVE7
LinkDB
All DBs
Position
5:2651215..2656884
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AA seq
501 aa
AA seq
DB search
MEDKRPENVGILAMEVYFPSSYVDQNKLEDFDGVSKGKYTKGLGQEEMGFCHDNEDINSL
CLTVVARLMEKNHVDYKDIGRLEVGTETIIDKSKSVKSVLMQLFDESGNFDVEGVDTSNA
CYGGTSALFNAVAWVESSAWDGRYALVVCGDIAVYASGNARCTGGAGSIAMLIGPSAPLV
IEPGLRASYMRHAYDFYKPDLTSEYPVVDGKLSVQSYITALDNCYQNYCRKASKKIKTKS
STFNLSNIDYMLFHSPYCKLVQKSVARIVLNDYVHQEHQHYSKDDQTQLKDLCQFKDASL
DNSIFNKPLETAFVKASECLFERKTKPSLLLARQVGNMYTPSLYSCLASLLISTSLNELT
GKRIGLFSYGSGLAASMFSLRVTEHAGLPEVVNPAKVNDLPTFTLHSLVSGLLEIRVKLK
QRTQLEPERFTAILECREKTHTLANYSPQSTNEHIFPGTYHLTHVDEKFRRTYERKPLPH
PDMNGNSSQNGAENFTHTNGF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaggataaaagacctgaaaatgttggcattcttgccatggaagtttattttccatct
tcatatgttgaccaaaacaaactagaagactttgatggtgtttcaaagggtaaatacacc
aaaggtctgggacaagaagagatgggtttctgtcatgataatgaggacatcaattcattg
tgcctcactgtggtggcaaggttaatggaaaagaaccatgtagattataaagacataggt
cgcttagaagttggtacagagacaataattgataaatcgaaaagcgtgaagagcgttctg
atgcagttgtttgatgaaagtggaaattttgatgtagaaggcgtggatacaagcaatgct
tgctatggtggaacaagtgctttgtttaatgcagtcgcatgggtggaaagctctgcctgg
gatggtagatatgctttggttgtgtgtggtgatattgcagtgtatgcaagtggtaatgcc
agatgcactggtggagctggttccatagcaatgttgattggaccctctgctccacttgtt
atagaaccaggtcttagagcaagttacatgcgacatgcttatgatttttacaaacctgat
ctaacatcggaatatccagttgttgatggaaaactatcagtacaaagttatataactgcc
ctggataactgctatcaaaactactgccgaaaagctagcaaaaaaattaaaactaaaagt
tcaactttcaacttatccaacattgactacatgttgttccacagtccatattgcaaactt
gtccaaaaatcagttgctcgcatcgttttaaatgattatgttcatcaggaacatcaacat
tactcaaaagatgaccaaactcagttaaaggatctttgccaatttaaagacgcgtcattg
gacaattcaatatttaacaaaccgcttgaaactgctttcgtaaaagcaagcgagtgtttg
tttgaaagaaaaacaaaaccgtcgttgctgcttgcacgtcaagtaggcaacatgtacaca
ccctccttgtacagctgtcttgcatcccttcttatcagcaccagtttaaatgagcttact
ggcaaacgaattggtttattttcctatggctctggtttagcagcttcaatgttttcgcta
cgcgtcactgagcatgcggggttaccggaggtcgttaaccccgcaaaggtcaatgacctc
ccaacattcaccttgcatagcttggtgtctggtttgctagaaatccgtgtaaagttaaag
cagcgcacacaacttgaaccagagcgttttactgcaattttagaatgtagagaaaagact
cacactttagccaactacagcccacaatcaaccaacgaacatattttcccgggcacttac
cacctcacccatgtagatgaaaaattccgacgaacctatgaaagaaaacccctccctcac
ccagatatgaatgggaattcctctcaaaatggggctgaaaatttcacccacacaaacggc
ttctaa
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