Ciona intestinalis (yellow sea squirt): 100175549
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Entry
100175549 CDS
T01056
Name
(RefSeq) ER degradation-enhancing alpha-mannosidase-like protein 2
KO
K10085
ER degradation enhancer, mannosidase alpha-like 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100175549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cin04091
]
100175549
Lectins [BR:
cin04091
]
M-type lectins
100175549
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_47
Motif
Other DBs
NCBI-GeneID:
100175549
NCBI-ProteinID:
XP_002127890
Ensembl:
ENSCING00000020392
LinkDB
All DBs
Position
11:261599..267785
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AA seq
563 aa
AA seq
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MGKFYLVLLIMLVLVSNCFGGNSNEDELSDLRNKVKDMFYHAYNGYLERGYPYDELRPLT
CDGVNTWGSFSLTLVDALDTLAVLGNYSEFRRVANELTNNIDFNINVNVSVFETNIRVVG
GLLSAHLMADKAGLELTPGWPCSGPLLDLAVDVADRLLPAFNTPTYMPFGTVNLRYGVDA
NETPITCTAGVGTFIVEFATLSRLTGDAKYEEIAMKAIHALNQSRSNIGLLGNHINVITG
KWTALDSGIGAGVDSFYEYLVKGSILLDMPELMEMFKEFLGPIEKYLKQGDWYMWANMNT
GSITLPIHQSLEAFWPGLQTLYGDTENAYKTILSYYDVWDKYGGTPEFYSITQSEPFNGR
EGYPLRPELIESTMYLYKSNKDPRLLEFGKQLLRSIEKVAKTNCGYATVKDVRDHRLDNR
MESFFLAETIKYLYLLFDPENPLLTTMKGASLREFGDGRECILGAGGYIFNTEAHPIDVS
ALHCCDIMRKDTENSNIWNTFKSFDAKTLFTVNRSGWEPNPEPSGQRTWAGSDDRNVSRL
VTNCDAESYHMKFMKHGQIFTEA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagttttatctcgtacttttaataatgcttgtgttagtttcaaattgttttggt
ggaaattcaaatgaagatgaacttagtgatttaaggaacaaagtaaaggatatgttttac
cacgcttacaacggatacttagaacgaggttacccctacgatgaacttcgacctttgacc
tgcgatggggtcaacacttgggggagcttttcccttacactggttgatgcgcttgatact
ttggcggtgttggggaactacagcgaattcaggagagtcgcgaatgaattaacgaacaac
atcgacttcaatataaacgttaatgtgtcagtgtttgaaacaaatattagagtggtcggt
ggtctactgtcagctcatctaatggcagataaagcagggttggaattaacaccagggtgg
ccgtgtagtggaccactgcttgacttggctgtggatgtggcagatagattgttaccagcg
tttaacacacccacgtacatgccttttgggacggtgaacctacgttatggggtggatgcg
aatgaaacacccatcacatgcactgcgggggtgggaacgtttatagtggagtttgctaca
ctaagtagattgaccggtgacgccaaatatgaagaaatcgctatgaaggcaattcatgct
ttgaatcaatcaagatctaatattggtttgttgggcaaccacataaatgttataacgggc
aaatggacggcgctcgactctggcattggggcaggggttgattcgttctacgaatattta
gtgaaaggatcaatattactggatatgcccgagttaatggagatgtttaaagagttcttg
ggtccaatagagaaatacctgaagcagggtgattggtatatgtgggctaatatgaacaca
ggttcgatcacccttccaatccatcagtcactcgaagccttctggccgggtttacaaact
ttatacggagacaccgagaatgcttacaagacgatactaagttactacgacgtgtgggat
aaatatggtggaacgcccgagttttacagcattacacaatcagaaccttttaatggaagg
gagggctacccgcttagaccagagttgatagaaagcacgatgtatctttataaatcaaac
aaagatccaaggctactggagtttgggaaacaattgttacgttccattgaaaaagttgct
aaaactaattgtggttacgcaacagttaaagatgtgcgcgaccatcgccttgacaaccgg
atggaatctttttttctcgctgaaacgatcaaatatctgtaccttctgtttgacccagag
aacccactgctaaccaccatgaagggggcatcactgagggagtttggggatgggagggaa
tgcatactgggggctggtggctacatattcaacacagaagcccacccaatcgacgttagt
gcgctgcattgttgcgacataatgagaaaagatacggaaaattccaatatttggaacacc
tttaaaagtttcgatgcaaaaactttgttcacggttaaccgtagtgggtgggagccaaac
ccggaaccttcaggtcaaagaacttgggcaggaagtgatgatcgtaatgtatcacggtta
gtgacgaattgtgatgcggaaagttatcatatgaagttcatgaaacatgggcagatattt
accgaggcttaa
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