Ciona intestinalis (yellow sea squirt): 100176686
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Entry
100176686 CDS
T01056
Name
(RefSeq) sphingomyelin phosphodiesterase-like isoform X1
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00600
Sphingolipid metabolism
cin01100
Metabolic pathways
cin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100176686
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100176686
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
100176686
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
HEPN_Cthe2314
Motif
Other DBs
NCBI-GeneID:
100176686
NCBI-ProteinID:
XP_018670523
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MHCFVIVLFCLFINGSIATPVRKFEKIRNDVDRVRNIRENIVHDVSTFIQKKSTHVQGEM
TTKCSACIFLVNYEKMRLEEDPSSMEELGEMVEKGCEYFRIETPRICKGAYSIFGPEATA
VLTQVDLSAESICGICLPYFCPDIPDARNSGNRSDWLVSLPPLRRKRTWKSNIMEIPTKT
LKILHLSDVHIDLQYKVGSNAVCNEPLCCRSQGGDKVPTIIDPIRGEAPMTKKINETNKA
WKWGDYRTCDLPWWTVNDILQKLSKTNQEEPFDYILWTGDVPAHDVWSQNRLNQLYMLHN
ITSLLVQYFPNTPVFPAVGNHDSFPSNNFPPASVNTGAAYSAQWFYNALWKAWSVWLPSS
TKETIELGGFYSTLVKPGFRIVSLNTNFCYTENWWVWLDPVDPSGKNECLSSLLISWYNF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtttcgtcatcgttttgttttgtttgtttattaacggaagtatcgcgacgccg
gttcgcaagtttgagaagatacgaaatgacgtcgatcgagtgcgtaatatacgagagaat
atcgtccatgacgtcagtacgtttattcaaaagaagagcacccacgttcagggtgagatg
acaaccaaatgctccgcttgtatcttccttgttaattacgagaagatgaggttggaggaa
gatccatcctcgatggaggagttaggagaaatggttgaaaagggatgcgagtattttagg
attgagacacccaggatttgtaaaggggcttactccatatttggtcccgaagcaactgct
gtgctcacacaggttgacttatcagcagaatctatatgtggaatctgcctcccttacttc
tgccccgacataccagatgcaagaaactcaggcaaccgttctgattggttggttagttta
cctccgttgcgaaggaaacgaacgtggaaatcgaatattatggaaattccaacaaaaaca
ctaaagattctccatctaagcgacgtacatatagaccttcaatacaaggttggtagcaac
gctgtgtgtaatgaacctctatgttgccgctcacaaggtggcgataaagtaccgacaata
attgatcctataagaggggaagcacccatgactaagaagataaatgaaacaaacaaagcg
tggaagtggggggactatagaacatgtgaccttccatggtggacagtcaacgacatttta
caaaaactttcaaaaacaaaccaagaagaaccctttgactacatcctatggacaggagac
gtaccagcgcatgatgtgtggtcacaaaaccgattgaaccagctgtatatgttacacaac
attacatcactgctggttcaatatttccccaatactccagtgtttccagctgtgggaaac
catgatagttttccttctaataatttcccaccagcatcggtcaacactggtgctgcatat
tcggcacagtggttttataatgcattgtggaaagcatggagtgtatggctgccttcatca
acaaaggagactatagaacttggaggattctattctacacttgttaaaccaggcttccgt
atcgtatctcttaacacaaacttttgctacactgagaactggtgggtgtggttggaccca
gtggatccgagtggtaagaatgaatgtttaagtagtttattaatatcatggtataacttc
taa
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