Ciona intestinalis (yellow sea squirt): 100176690
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Entry
100176690 CDS
T01056
Name
(RefSeq) lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog
KO
K19363
lipopolysaccharide-induced tumor necrosis factor-alpha factor
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100176690
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GFIT
Motif
Pfam:
zf-LITAF-like
Zn_ribbon_TFIIB
Znf_XAF1_N
DUF7479
Zn_ribbon_8
DUF7838
Zn_ribbon_20
Motif
Other DBs
NCBI-GeneID:
100176690
NCBI-ProteinID:
XP_002131750
Ensembl:
ENSCING00000021435
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All DBs
Position
4:2418042..2419147
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AA seq
173 aa
AA seq
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MAQNQPVPAGYPGAPPAYTPGVDEKSGMPLGGAAYPQQPGYPQAQPGFVGQPVPPGQPGA
PMGQPGAPMGPPPAGYVPPPPGQAYGMPTQTVIIQQQFSQAPTACTCPNCHQSVVTRTVA
ETSMLTWLIAGGIILLGGWIFCLCFIPFCIDDLKDVRHQCPNCNHTIHIYKRA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaaccagcccgtaccagccggatatcctggcgccccacctgcgtatacacca
ggggtagatgagaagtcaggcatgccactaggtggggcagcttacccacaacagcctggt
tacccgcaagcgcaacctgggtttgttggtcagccagtgccacctggccaacctggcgca
cctatgggacaacctggcgcaccaatgggcccgccaccagcaggctatgtacccccgcct
ccaggtcaagcttatggcatgccgacacagaccgttattatccagcagcagtttagccaa
gctccaacagcgtgtacatgtcctaattgtcaccagagtgtagtcacacgcaccgtcgcc
gaaaccagtatgttaacatggctgatagcgggtggtatcattcttctcgggggatggatc
ttttgcctttgcttcataccgttctgtattgatgacctcaaagacgtacgacaccagtgc
cccaattgcaaccacaccattcacatttacaagcgagcttaa
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