Ciona intestinalis (yellow sea squirt): 100177602
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Entry
100177602 CDS
T01056
Name
(RefSeq) tectonin beta-propeller repeat-containing protein 2-like isoform X1
KO
K23881
tectonin beta-propeller repeat-containing protein 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100177602
Membrane trafficking [BR:
cin04131
]
Autophagy
Other autophagy associated proteins
Others
100177602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_HPS5
Hyd_WA
Tectonin
Apolipoprotein
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
100177602
NCBI-ProteinID:
XP_009858203
LinkDB
All DBs
Position
3:6060951..6073537
Genome browser
AA seq
1520 aa
AA seq
DB search
MEGDILCQRPLAYDFLEATPSKAQFGFKSHNIQVTCFHVCESHIVFGTDKGCAFLHSRRN
GHMMQLLSEDRKDFVKTVRLLSGIECQVAMGTSDGRVIVIIFSSTADGVAKQVRKFFLGK
LHPSSVSCMEWSSNGMKLFSADALGSIYCTKVDTEANSCHASSIYQETSEVTQLEYRHKI
LLISTMEHTLLYNTDQNIFTNVGSKPIRKGPYGGCFNINTLVERELKVFATRPNLRFWVA
DNTGKVLSTVKMKENLQQHKKLISLEETSDEVPQSVDQSKLQLGKVLHVGKHCFVTFTDS
TLCVINHSSNAIVGLISNCTEIMDVATTCDEIFILSSNRKLYRLAWTPDQVYMGSKSHNA
HSSATETFKKDMKESFADIRSHLSPYVDTLQLKMASSAEQLTNKLQSQAKTLKNKVSFLP
VSDLAGKLISSNLESVRRGSNVSEVVELSRCLEDSPPKIKTTDEDVVQLVMRELVDQVCE
LRDQDEFLRSQGIVTSQTHSVYHVVDTTAEQPRKSFFDEVEYFASKETEDILFSSKIRKK
KHRKGSILHPVEISKVECDVVGKSTLTSDLHSVQTLKDNRKESLFFNTEEDHTNDSDEFE
VAIFNDETHLEHNSRKPKKCGNEHIKSESAEKLSHNDIDTVEKPSQIDLVCHIERSLDIK
AENSNEIFPEELFLEKWQTSAIENDSVCVKDDQNGVTSSHDPTNQYTESPSHSQDIMNHT
YDLNDFPDDIELQTTQRKTSEHDEFFQEDHTDDLEQFSPKTKKSFNFDEVTVSKPKEENE
FGLKIDSDVLSSIQSLTESSQPEEESECLQSSISFDIYAVKDGDHDFQSEEEESVQDNFP
ELDDDVKNTVSDEIIGQCDEQSTQSENLLSSDVVRTASASDVWTIHVTPKDSIIKLAASS
SGDTICHVAYGNNVFVAMETLNNEYRMTWNKLEKLATQVSISPSGDVVWIVTTHRDVYAS
KINRKQNSFTDWELVASGSHFVCLTATDGWIASGDKLLHISNVNSTQPCGLNTQEIELDG
ELKISHISVTNEVIWLLVDGCIYCKSLHMLENNEIWRKVNNPHSLNGEDLKVKMITSDYN
TTMWGVDEIGNSWFRSKVTHRNPKGCHWWQVYMNEYLYDDHRRLPFLSIQVLPKMPSSII
AAEKYASDVITNSIDKLSNWIHGSSQVITVCISLRAVWIASSDKKLHVCRGPVTGNRWSV
PNIPGIASSTKWNHIVSSSYFSSDSGSWEGLVWVARSNGEIICFPSSTNEQNHTIAIAPP
TADETNVVSLSACRNALWMVLDSGEIWVRSGISNEYLEGKSWERVEYNNQLDVKMLHISC
GSQYVWAVDTNGEVYMRVGVTVTDDHTTMTPAWLSLGNSPFNASGSKFIQVVCGPSDNNV
WAVDNLGKVFIRTQITNECPVGEDWKIVEGALVKQIVISNHSVWALKQDGSLLRRFGISH
SDFSGDYWKKIPGNFFALAVTPYDELWAIDQHFRLRGHITQAYRPPLLEMFHNDESEVTS
EKGSHDDETIAPDDVTWEFI
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacattctgtgccaacgcccgcttgcctacgattttcttgaggctacacca
tcaaaagctcagtttggttttaaaagtcacaacattcaagttacctgttttcatgtttgt
gaatctcacatcgtgtttggaactgacaagggttgtgcatttcttcatagcaggagaaat
ggacacatgatgcaacttctatcagaggatagaaaggattttgttaaaactgttagatta
ttatctggaattgaatgtcaagtcgccatgggaacaagtgatggtagagtgattgtgatt
atattttcaagcacagctgatggtgttgcgaaacaggttcgtaagtttttccttggcaag
cttcacccatcctcagtatcatgcatggaatggagcagcaacggaatgaagttgttttcc
gctgatgctttaggttcaatctattgtaccaaggtggacactgaggccaacagttgtcat
gcaagtagcatatatcaagaaaccagtgaagtcacacaactggagtaccgacacaaaatc
ttactcatttcgaccatggaacatacactgttgtacaacacggatcaaaatatattcact
aatgtcggttcgaagccaattcgaaaggggccatacggaggttgctttaacattaacaca
ctggtggaacgcgagttgaaagtatttgcaacgcgtccaaacctgaggttttgggttgct
gataatactggtaaagtcctctccaccgtgaaaatgaaggaaaatcttcagcaacataaa
aagttaatctcacttgaagaaacttcagatgaggttccacaatctgttgatcagagtaaa
ctacagttgggaaaagttcttcatgttggaaaacattgttttgttacttttacagattcc
acattgtgtgtgataaaccattcatcaaacgcaatagttggattgatttcaaactgcaca
gaaattatggacgtagctactacgtgtgatgaaatatttattttgtcctcaaacagaaaa
ctttatagattagcatggacaccagatcaagtttacatgggtagtaaatcacacaatgca
cattcaagtgcaacagaaactttcaaaaaggatatgaaagaatcgtttgccgacatcaga
agccatctttccccatatgttgacacactacagttaaagatggcaagcagtgctgagcaa
ttgaccaacaaactacagtcccaagcaaaaactttaaagaataaagtttcgttccttcct
gtatctgaccttgctggaaagttgatatcctcgaaccttgaatctgtaagaagaggtagc
aatgtatcggaggtggttgagctgtcacgatgtcttgaagattctcctcccaagatcaag
acaactgatgaagatgtcgttcaacttgtgatgagagaacttgtggatcaagtttgtgaa
ctgagagaccaagatgagttcctacgctcacagggaattgtgacatcacaaacacattca
gtttaccacgtggttgacactacagccgaacaacctcgaaaatctttctttgatgaagtg
gagtattttgccagcaaagaaactgaagacattttatttagttcgaaaattcgtaaaaag
aagcatagaaaaggttcaatcttgcatccagtcgaaatatcaaaagttgaatgtgatgtt
gttggcaagtcaactttaaccagtgaccttcattctgtccagacattaaaagacaaccgg
aaggaaagtttgttttttaatacggaggaagatcatacaaacgattcggatgaatttgaa
gttgcgatatttaacgatgagactcatctagagcacaattcaagaaaaccaaaaaagtgt
ggaaacgaacacattaagagtgaaagcgcagaaaaactgtcccataatgacattgacaca
gttgaaaaaccctcacagattgatctagtttgtcacattgaacgatctcttgatattaaa
gcagaaaattcgaatgaaatatttccagaagaattatttcttgaaaaatggcaaacttcg
gcaattgagaatgattctgtttgcgttaaagatgatcaaaatggtgtaacatcatctcat
gatcccactaaccaatatacagaaagtccaagccactctcaagatattatgaatcacaca
tatgatcttaacgactttcctgatgacatagaattacaaacaactcaaagaaaaacaagt
gaacatgatgaattctttcaagaggaccatactgatgatttggaacaattttcacctaaa
actaaaaaaagttttaattttgatgaagtaacagttagtaaaccaaaagaagaaaatgaa
tttggtttaaaaattgactctgacgttttatcttccatccaaagtttaactgagagttca
cagcctgaagaagaaagtgaatgtttacaaagttcaataagttttgatatttatgccgtc
aaggacggagatcatgattttcaaagtgaagaagaagaatcggtccaggacaactttcca
gaattagacgatgatgtgaaaaatacagtcagtgatgaaataattggacaatgtgatgag
cagagtactcagtcagaaaatcttctctcaagcgatgtggttcgaactgcatctgcatca
gatgtttggacaatacatgtcactcctaaggacagcataattaaactggcagcctccagc
tctggggataccatctgccatgttgcttacggcaacaatgtttttgttgccatggaaaca
ttgaataatgaatatagaatgacgtggaacaagttggaaaagttggcgactcaagtttca
atatcaccatctggtgatgtagtatggatagtaactacccatagagatgtctatgcttct
aaaatcaaccgaaagcagaatagttttactgactgggaacttgtggcaagcggcagccat
tttgtttgtctcactgctacagatggttggatagcatcaggagataaactgcttcatatt
tctaatgtcaattctactcaaccttgtggtttaaatacacaagaaattgaactggatggt
gaattaaagataagtcatatatcagtaaccaatgaagttatatggttgttagtagacggt
tgtatctattgcaagtcacttcatatgttggaaaataatgaaatatggagaaaagtaaac
aacccgcactcattaaatggtgaagacctgaaagttaaaatgatcacatctgattacaac
acaactatgtggggggtggatgagattggcaactcctggttcaggtcaaaggtcacacat
agaaatcctaagggttgtcactggtggcaggtttatatgaatgaatatttgtatgatgac
cacagaagacttccgtttctttcaattcaagtcttaccaaagatgccatctagtatcatt
gcagcggagaaatatgcatcagatgttattactaactcaatagataagttatcaaattgg
attcatggttcttcacaagtaatcacagtctgcataagtttgagggcggtgtggatcgct
tcaagtgataaaaagttacatgtctgcagaggacctgttacaggcaacagatggagtgtt
cctaacattcctggtattgcatcgtcaactaaatggaatcatattgtgtcttcctcgtat
ttttcatctgacagtggctcttgggagggtttggtatgggttgcccgtagcaacggagaa
attatttgttttccatcttcaacaaatgagcaaaaccatactattgcgattgcaccacct
actgcggacgagacaaatgtggtgtcattgtccgcttgccgcaatgcattgtggatggtt
ttagattccggcgagatttgggtaagatcgggaatttcaaacgagtatcttgaaggcaaa
tcgtgggaacgagttgaatacaacaatcaactggatgtaaaaatgttgcacataagttgt
gggtcgcagtatgtgtgggcggttgatacaaatggagaagtttacatgagagttggggtg
acagtgactgatgatcacaccactatgacacctgcatggttatcgcttggtaactcacct
ttcaatgcaagtggatcaaagtttatacaggtggtctgtggaccttcagataacaatgtc
tgggcagttgataacttgggaaaagtgtttataagaacacagataactaatgaatgtcca
gtaggggaggattggaaaattgttgaaggggctctggtaaagcagattgtgataagcaac
cacagcgtttgggctttaaaacaagatggttcactactacgtcgctttggaatatcccac
agtgatttttctggggactattggaagaaaatacctggcaactttttcgcacttgctgtc
acaccatatgatgagctttgggcaattgatcaacattttcgtttgcggggtcatatcact
caagcctacagaccccctctattggaaatgtttcacaatgatgaatctgaggtcacgagt
gaaaaaggatcacatgatgatgaaacaatcgccccagatgatgttacttgggagttcatt
taa
DBGET
integrated database retrieval system
