Ciona intestinalis (yellow sea squirt): 100177646
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Entry
100177646 CDS
T01056
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100177646
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100177646
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
100177646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
100177646
NCBI-ProteinID:
XP_002120220
Ensembl:
ENSCING00000021421
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MVKETELNDKDLREELSKYGVAVGPILPTTRGVYVKKLQKLKTENKCPGYQKSTNGNHSD
SSTKSNRKLKQTKIARKTFGFSSDESDNEEKLNKGRSYITRKTRRSSPVNQTPPVNQTSS
KETKKPIHRKVEGLAEPRRSRRSVTPVSQASVANGYSDDSDEEKWEEVTSVDISTSPYLH
HSPRSSLTPRRPLMPQRSIMTSSRLSHSSKIETPLSAVTRNGGKSLRKRKFDSTKDDDND
ESASHEYDDSADEVVASAENFEPKNSERNFFSSFKSLFSSRKPGQFANSEVGLQNSWRLH
CSVLLPIGTVVFFIILGLLYITMRSDSLVHSERLIDISETLKIDSPKPMAIVNSMYDILS
KAAGDKICNYTEASDVLSFNKLKKTVQANEGDFMEALKLIKLNPQWEFVMWKDRKQLLGK
DDNVKDVRYLSSLRPFIPTLCRFWRAVEKVLFRVTMVVLAMIIIWLSIIYQQYRARKLNE
EKQLMFDLVEKILDVLKKHYETSCTDGDIQPFLPILHARDMIIQPQDRKRMSGAWDKAVH
FLSASESRIRVETQRISGEDFDVWRWIQVTSPSKKQQTPGRVWQGEAFDTNRSINTPSIS
PTPCLKIRSMFDPDVEKAGEWQIQIQDSILEKCVGNNGIVCIVVEKASNEGLVYVKCLTN
AAAGQVFRSLHGSWFDGRLVTVKFISLNRFHSHYPSTVNLTTPLTPSSSKPTSTFLPQTP
GFSTSTPLKAS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagaaacagaattgaatgataaagatttacgggaggaattatccaaatatggg
gtcgctgtcggaccaatactccccaccactaggggcgtatatgtgaaaaaattacaaaaa
cttaaaactgaaaataaatgcccgggttaccagaagtccacgaatggaaatcattcagat
tcgtcgacaaaatcaaatagaaaattgaaacaaaccaaaatcgcaagaaaaactttcggg
ttcagttcagatgaaagcgacaatgaagaaaaattgaacaaagggaggtcttacatcaca
agaaagacgagaaggtcatcacctgtcaatcaaactccacctgtcaatcaaacaagttca
aaagagacaaagaaaccgattcataggaaagtagaaggactcgctgaaccacgtcgtagt
cgtcgaagtgtgacacccgtgtcacaagcatcggttgctaacggttactcggatgattca
gatgaagaaaaatgggaggaagtgacgtcagttgacatcagcacgtcaccataccttcac
cactccccacggtcgtcattgacccctcgacgacctctgatgccacaaaggagcattatg
acatcatcgagacttagccacagtagcaaaatagagacgccattgtcggcggtaacaagg
aacggaggaaaatcgctgcggaagcgaaaatttgattcaacgaaagatgacgataatgat
gagtcagcatcgcatgaatatgatgactcagcagatgaagttgttgcttccgccgaaaac
tttgagccgaaaaactctgaaagaaactttttctcttcttttaaatcgttattttcgtca
cgaaagcctggtcagtttgccaactctgaggttggtttgcaaaactcatggaggttgcat
tgttcagtgctcctacctataggaacagtggtgttcttcattatacttgggttgctgtac
attacaatgaggtcggatagcttggtgcattccgaaagattgattgacatttcggaaact
ttaaaaatagactcaccaaaaccaatggcaatagtcaactctatgtacgatatactttca
aaagcagcaggagataagatttgtaattacacggaagcttcagatgtgcttagttttaat
aaactaaagaaaactgtccaggcaaatgaaggcgattttatggaagcgttaaagttgatc
aagttgaacccacagtgggagtttgtgatgtggaaagataggaagcaattgttggggaaa
gatgacaatgtcaaggacgttcgttacttgtcatcgcttcgacccttcatccccaccttg
tgtcgattctggcgagccgtggagaaagttttatttcgtgtaacaatggtggtgcttgcc
atgatcatcatatggctgtcaatcatctaccaacaatatcgggcacgtaagttaaacgag
gagaagcaacttatgttcgatcttgtggaaaaaatattagatgttcttaagaaacattat
gaaaccagttgtacagatggcgatatacaacctttcctgccaatactacatgcaagggat
atgataatacaacctcaggacaggaagagaatgagcggagcgtgggacaaagccgtccat
ttcctctcggcgagtgaatcgaggatccgcgttgaaactcaacgaatatcaggggaggat
ttcgatgtttggagatggatacaggtaacctcccccagcaagaagcaacaaacccccggc
agggtatggcaaggtgaagcgtttgacacaaacagatcaatcaacacaccaagtataagt
cctacaccatgtttgaagatcagaagcatgtttgacccagatgtagagaaagctggtgaa
tggcagatacagatccaggattcgattcttgagaaatgtgtcggaaataatggaattgtt
tgtatagtggtggagaaggcttctaatgagggtcttgtttacgtgaaatgcctcacgaac
gcagcagctggtcaagtgtttcgttcgctccatggttcgtggttcgatggccgcctcgtc
accgttaagtttatctcgcttaaccgattccattctcattacccgagcacagtgaacctc
acgacccccttaaccccatcctcatctaaacccacttccaccttcctaccccaaacccct
ggcttttccacctcaaccccactaaaggcttcctaa
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