Ciona intestinalis (yellow sea squirt): 100178020
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Entry
100178020 CDS
T01056
Name
(RefSeq) Bardet-Biedl syndrome 5 protein
KO
K16748
Bardet-Biedl syndrome 5 protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100178020
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
BBSome
100178020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBL5
bPH_3
Vps36_ESCRT-II
Ivy
Motif
Other DBs
NCBI-GeneID:
100178020
NCBI-ProteinID:
XP_002124803
Ensembl:
ENSCING00000002875
UniProt:
F6T0X5
LinkDB
All DBs
Position
7:complement(465862..467488)
Genome browser
AA seq
345 aa
AA seq
DB search
MDVLWEDRDVRFDLSLQQMNMRPGEFVIQTFNSVEDTKGNNGDNGKLLVTNLRIMWHSHT
LPRVNLSIGFGCIHNITTRRTNSKLRGPTESLCISTKCNSNKFEFIFTNDVSEQGGLFVT
VMSVSKAYDSTKLYRDLKLRGSLIQGKQLKMLPKEEIYNRINGVWNLSSNQGNLGTFFVT
NIRVVWHANMNESFNVSVPYLQIQTVKVRDSKFGYAMVIESTWQSGGYVLGFRIDPIEKL
QEAAKEIQSLHRVYSASPIYGVEYHKESIVHEDSGANDGQIMAPVTEDLDIDTSIKTDAS
VAYFADGASYENNESAAPPVFCPELGLAIEPIKPGYTLKSLWSIL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggatgttctgtgggaagacagggacgttcgctttgatctgagcttgcaacagatgaac
atgagacctggagaattcgtaatacaaacttttaactcggtagaagacaccaaaggcaac
aacggggacaacggaaaactgctcgtgacgaatttacggataatgtggcattctcatact
ctacctagagtaaacctttctattggtttcggctgtatacataatattaccactagaaga
accaactctaaactaagaggcccaacagaatctctgtgcatttccacaaaatgcaacagt
aataaatttgagtttatttttaccaacgatgtttctgagcaaggtggacttttcgtcact
gtcatgtctgtgtctaaagcatatgactctacaaaactgtatagggatttaaagctgagg
ggatcactgatacagggaaagcaactgaagatgctgcccaaggaggaaatctacaatcgc
atcaatggggtttggaatttatccagcaaccaaggaaatctaggaacattttttgtgaca
aacatccgtgttgtgtggcatgctaacatgaatgaaagctttaatgttagtgtgccgtat
cttcaaatacagaccgttaaagtgagagactcaaaattcggttatgccatggtgatagaa
agcacgtggcaaagtgggggctatgtgcttggctttcgaattgacccgattgagaaactg
caagaggcagcgaaagagattcaaagcctccacagagtctactcggcaagtcccatttat
ggtgtggaataccacaaagagtccattgtgcatgaggacagtggagcaaatgatggtcaa
attatggcaccggttacagaagatttagatattgacaccagtattaagacagatgcatct
gtggcttattttgcagatggtgcatcgtatgagaacaatgaaagtgcagcaccaccagtt
ttttgtccggaattgggccttgcaattgagccaattaagccaggatacacactgaaaagc
ctttggagtattttatag
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