Ciona intestinalis (yellow sea squirt): 100178317
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Entry
100178317 CDS
T01056
Name
(RefSeq) 4-coumarate--CoA ligase 1-like
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00130
Ubiquinone and other terpenoid-quinone biosynthesis
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
100178317
Enzymes [BR:
cin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
100178317
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
100178317
NCBI-ProteinID:
XP_018668720
Ensembl:
ENSCING00000013016
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Position
9:3745964..3750316
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AA seq
523 aa
AA seq
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MVLTRPNDLPLPSVGYSSYYLPILKGFGENIALVDIGNEEASYTFSQVHDNSIKYANLLI
KLGIGNGDVIALCCGNCAEYLMLLLAAAELGVSVTTCNPKHTQSEMIHQFNVVAPKLVIA
DSNIVEKLEHVSEAVTAIKKIATLGKHEKYICLRQSLNQESSVKEYVPVTSKRDISNTPF
VLPFSSGTTGKPKAVQHSQAIYTAYTLLWSATLKLPNHGICYCIVPMFHMFGMVTSLSAI
TQGCKLIVGTKFEASSSLAAIEKYKITHAPLVPPMVIAFSKENLQKYDLSSMEYILSAAA
PLPVKVGDNLRELWKTVKINQCYGMSEAAPLSGCLEPDCPKESVGRLAFNLQVKVVDVKT
GKELGPNLDGELRYKGPQVFMGYYNAPEATRNSFDEDNWFRSGDIGHYDERGYIYIVDRL
KDLIKYKGFQVSPAEIERVLFENPKIADAAVFGVPDNEAGELPRAFIVKRKESLTASEVH
EYLKDRLSSYKQLRGGIIFRDSIPKAQSGKVIRRSLRSVESKL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgacacgtcctaatgatttgcctttgccaagtgtaggctacagcagttactat
cttccgatactaaagggcttcggagagaatatagctctggttgatattggaaacgaagaa
gcaagctacactttctcacaagtacatgacaactcaatcaaatatgcaaacctactaata
aagttaggtattggcaacggagatgttattgctctctgctgtggaaactgcgcagagtat
ttaatgctattattagctgctgctgaattgggtgtgagtgttacaacctgtaatccaaaa
cacacacaaagtgaaatgattcatcagttcaatgttgttgcaccaaaacttgtaattgcc
gattcaaatatcgtggaaaaactggagcatgtttcagaagctgtaactgccatcaagaaa
atagcgacgcttggaaaacatgagaaatatatctgcttacggcaatcattaaatcaagaa
tcttctgtgaaagagtacgttccagtgacgtccaaacgagacattagcaatacacctttt
gttctcccgttttctagcgggaccactggaaaaccaaaagcagttcaacattctcaagct
atatatactgcatacaccttgctatggtcagccacattaaagcttcccaaccacggaata
tgttattgcattgtaccaatgtttcatatgtttggaatggtcacatctctcagcgctatc
acgcaaggctgtaaactcatagttgggactaaatttgaagcttcgagcagccttgccgca
atagaaaagtacaagattacacacgcccctcttgtaccaccaatggtgattgcgttttca
aaagaaaacttgcaaaagtacgatttgtcgtccatggaatacattctgtctgcagcagcc
cctttgccagtaaaagttggtgacaacttgagggagctttggaaaaccgtcaagataaac
caatgttatgggatgagtgaagccgcgccactgtcaggttgtctggagccggactgtcca
aaagaatcagttggtcgtttagcgtttaatttgcaagtgaaggttgtagatgttaagact
ggcaaagaactgggtccgaatctagacggagagttacggtacaaggggcctcaggtattt
atgggctattacaatgctccagaagcgacaaggaacagttttgatgaagacaattggttt
cggagtggagatattgggcactatgacgaaagaggttacatttatattgtagatcggttg
aaagacttgatcaaatataaaggatttcaggtatcaccggccgagatagaacgcgttcta
tttgaaaaccctaaaattgctgacgcagcagtatttggagtgcctgataatgaagcggga
gaacttccgagagcttttatagtaaagaggaaggaatctctgaccgcctcagaggtgcac
gagtatttaaaagatcgcctgtcaagttacaagcaactgcgtggaggtattatctttcga
gattcgattccgaaagcacagagtgggaaggttatcagaaggtcactgcggtctgttgag
agtaaactgtag
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