Ciona intestinalis (yellow sea squirt): 100178468
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Entry
100178468 CDS
T01056
Name
(RefSeq) actin, non-muscle 6.2-like
KO
K05692
actin beta/gamma 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03082
ATP-dependent chromatin remodeling
cin04145
Phagosome
cin04814
Motor proteins
cin04820
Cytoskeleton in muscle cells
cin05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100178468
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100178468
09142 Cell motility
04814 Motor proteins
100178468
04820 Cytoskeleton in muscle cells
100178468
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100178468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100178468
03019 Messenger RNA biogenesis [BR:
cin03019
]
100178468
03036 Chromosome and associated proteins [BR:
cin03036
]
100178468
03029 Mitochondrial biogenesis [BR:
cin03029
]
100178468
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100178468
04147 Exosome [BR:
cin04147
]
100178468
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100178468
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
100178468
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
100178468
NuA4 complex
100178468
Chromatin remodeling factors
BAF complex
100178468
PBAF complex
100178468
GBAF(ncBAF) complex
100178468
SWR1 complex
100178468
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
100178468
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
100178468
Exosome [BR:
cin04147
]
Exosomal proteins
Proteins found in most exosomes
100178468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
100178468
NCBI-ProteinID:
XP_002128671
Ensembl:
ENSCING00000000848
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGQPRHQGVMVGMGQKDTYVGDEAQS
KRGILTLKYPIEHGIVTNWDQMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFESFNTPAMYVGIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLTYVALDFEQEMQTAASSSSLEKSY
ELPDGQVITIGNERFRCPETLFQPAFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatgttgccgcactcgtagttgacaatggatccggtatgtgcaaggccggt
ttcgccggagacgacgcaccacgtgccgtcttcccatccatcgtaggacaaccccgtcac
cagggtgtcatggtcggtatgggacaaaaagatacctatgttggagacgaagcccagagc
aagagaggtatccttactctgaaatacccaattgagcacggtatcgtcaccaactgggac
caaatggaaaaaatctggcatcacactttctacaacgaactccgtgtcgcaccagaagag
cacccagttcttcttactgaggccccacttaacccaaaagctaaccgtgaaaagatgacc
caaatcatgttcgaaagcttcaacacccccgctatgtacgtcggcatccaggccgtgctt
tcattgtacgcttctggtcgtaccaccggtatcgttttggacagcggagacggtgtttcc
cacaccgtcccaatctatgagggttacgcccttccccatgcaattattcgtcttgacttg
gccggacgagatcttaccgattacttgatgaagatcttgaccgagagaggttattccttc
accaccactgccgagcgagaaatcgttcgtgacatgaaggaaaaacttacttatgttgct
cttgacttcgagcaagaaatgcaaaccgctgccagcagcagctcacttgaaaagagttac
gaacttcctgacggacaggtaattacaatcggaaacgaacgattccgttgcccggaaacg
cttttccaacccgcctttattggtatggaatctgctggtatccacgagaccacctacaac
tccatcatgaagtgcgatgttgacatccgtaaggacttgtacgccaacaccgttctctct
ggaggttccactatgttccctggaatcgccgacagaatgcaaaaggaaatttctgctctt
gcaccaccaaccatgaagattaagatcattgccccaccagagaggaaatactccgtctgg
attggaggatccatccttgcttcactctccaccttccaacagatgtggatcagcaaacaa
gaatacgacgagtccggcccatccattgtccaccgaaagtgtttttaa
DBGET
integrated database retrieval system