KEGG   Ciona intestinalis (yellow sea squirt): 100178468
Entry
100178468         CDS       T01056                                 
Name
(RefSeq) actin, non-muscle 6.2-like
  KO
K05692  actin beta/gamma 1
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03082  ATP-dependent chromatin remodeling
cin04145  Phagosome
cin04814  Motor proteins
cin04820  Cytoskeleton in muscle cells
cin05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100178468
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100178468
  09142 Cell motility
   04814 Motor proteins
    100178468
   04820 Cytoskeleton in muscle cells
    100178468
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    100178468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cin03021]
    100178468
   03019 Messenger RNA biogenesis [BR:cin03019]
    100178468
   03036 Chromosome and associated proteins [BR:cin03036]
    100178468
   03029 Mitochondrial biogenesis [BR:cin03029]
    100178468
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cin04812]
    100178468
   04147 Exosome [BR:cin04147]
    100178468
Transcription machinery [BR:cin03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     100178468
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     100178468
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     100178468
    NuA4 complex
     100178468
  Chromatin remodeling factors
   BAF complex
    100178468
   PBAF complex
    100178468
   GBAF(ncBAF) complex
    100178468
   SWR1 complex
    100178468
Mitochondrial biogenesis [BR:cin03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    100178468
Cytoskeleton proteins [BR:cin04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     100178468
Exosome [BR:cin04147]
 Exosomal proteins
  Proteins found in most exosomes
   100178468
SSDB
Motif
Pfam: Actin DUF6581
Other DBs
NCBI-GeneID: 100178468
NCBI-ProteinID: XP_002128671
Ensembl: ENSCING00000000848
LinkDB
Position
Unknown
AA seq 375 aa
MDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGQPRHQGVMVGMGQKDTYVGDEAQS
KRGILTLKYPIEHGIVTNWDQMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFESFNTPAMYVGIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLTYVALDFEQEMQTAASSSSLEKSY
ELPDGQVITIGNERFRCPETLFQPAFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggacgaagatgttgccgcactcgtagttgacaatggatccggtatgtgcaaggccggt
ttcgccggagacgacgcaccacgtgccgtcttcccatccatcgtaggacaaccccgtcac
cagggtgtcatggtcggtatgggacaaaaagatacctatgttggagacgaagcccagagc
aagagaggtatccttactctgaaatacccaattgagcacggtatcgtcaccaactgggac
caaatggaaaaaatctggcatcacactttctacaacgaactccgtgtcgcaccagaagag
cacccagttcttcttactgaggccccacttaacccaaaagctaaccgtgaaaagatgacc
caaatcatgttcgaaagcttcaacacccccgctatgtacgtcggcatccaggccgtgctt
tcattgtacgcttctggtcgtaccaccggtatcgttttggacagcggagacggtgtttcc
cacaccgtcccaatctatgagggttacgcccttccccatgcaattattcgtcttgacttg
gccggacgagatcttaccgattacttgatgaagatcttgaccgagagaggttattccttc
accaccactgccgagcgagaaatcgttcgtgacatgaaggaaaaacttacttatgttgct
cttgacttcgagcaagaaatgcaaaccgctgccagcagcagctcacttgaaaagagttac
gaacttcctgacggacaggtaattacaatcggaaacgaacgattccgttgcccggaaacg
cttttccaacccgcctttattggtatggaatctgctggtatccacgagaccacctacaac
tccatcatgaagtgcgatgttgacatccgtaaggacttgtacgccaacaccgttctctct
ggaggttccactatgttccctggaatcgccgacagaatgcaaaaggaaatttctgctctt
gcaccaccaaccatgaagattaagatcattgccccaccagagaggaaatactccgtctgg
attggaggatccatccttgcttcactctccaccttccaacagatgtggatcagcaaacaa
gaatacgacgagtccggcccatccattgtccaccgaaagtgtttttaa

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