Ciona intestinalis (yellow sea squirt): 100178481
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Entry
100178481 CDS
T01056
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100178481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
FlxA
ADIP
Knl1_RWD_C
Motif
Other DBs
NCBI-GeneID:
100178481
NCBI-ProteinID:
XP_002121961
Ensembl:
ENSCING00000000553
UniProt:
F6Q7A1
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MDTADSRHQSGENSSFASSQPESVDQIPQNHLNESPYVLNNEALSLESSLTTGDLNSVKA
QCEYSHKILQRQLQEMKNAVELEMRKRESDRDGNVLRANITKLEQRLTALQRMTAQQTDR
SLALKKEVGDNDAANKRANTDLTQKVEEIAREIAQIKEKQNELERKIESTSSSREQMAPE
NLSQMVDAFERQLGMYDVRIADMDQRFQVLETTSYSGVVIWKIRDFSRRKREAVSGRTLS
LYSQPFYTSRYGYKMCARVYLNGDGMGKGTHMSLFFVVMKGEYDALLPWPFRQKVTLMLL
DQGMDRRHLSDTFRPDPTSSSFKKPTSDMNIASGCPLFVAHNVIEGSSYVKEDTIFLRIH
VDTSDLENF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggataccgcagactcaagacaccagagcggcgaaaactcatcctttgcatcaagccaa
ccagaaagtgtggatcaaatcccacaaaaccatttaaatgagtcaccatatgttttaaac
aacgaggctttaagtttggaaagttcgttaaccacaggagacttgaattctgtgaaggca
caatgtgagtactcgcacaaaatcctacaacgtcaactgcaagaaatgaaaaatgccgta
gaattggaaatgagaaaaagggaatctgacagagatggtaatgtattgagggcgaatata
acgaaactggaacagaggttaacagcactgcagagaatgacagctcaacaaacggatcga
agtcttgcattgaagaaagaggtcggcgacaatgatgctgccaacaagagagcaaacact
gacttgactcagaaagttgaggaaattgctcgagaaatagcgcaaatcaaagaaaaacaa
aatgaacttgaaaggaaaattgaatccacaagtagcagcagagagcaaatggcaccagaa
aatttgtcacaaatggtggacgcttttgaacgtcagcttggtatgtatgatgtcagaatc
gcggatatggatcagcgatttcaggttcttgaaactacaagttactcaggcgtcgtcatt
tggaaaatccgggatttttctcgtcgcaagagggaggcagtgagcggacggacgttgtct
ctctacagtcaaccattttacacgagtcgttacggatacaagatgtgcgctcgtgtttat
ctcaatggagatggaatgggcaaaggaacacacatgtcgcttttttttgtggtcatgaaa
ggagaatacgatgcactactaccatggccgttcagacagaaggtaacactgatgctactg
gaccaaggaatggaccgacgtcatttgtccgacacattcagaccggaccctacgtcatca
tcgttcaagaaaccaacttccgatatgaacatcgcttctgggtgtccattgttcgtagca
cacaacgtcatagaggggagttcttacgtcaaggaagacacaatcttcttgcgtattcac
gtggatacgtcggacctcgaaaatttttag
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