Ciona intestinalis (yellow sea squirt): 100178711
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Entry
100178711 CDS
T01056
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X2
KO
K01116
phosphatidylinositol phospholipase C, gamma-1 [EC:
3.1.4.11
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00562
Inositol phosphate metabolism
cin01100
Metabolic pathways
cin04070
Phosphatidylinositol signaling system
Module
cin_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
100178711
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
100178711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100178711
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
100178711
Membrane trafficking [BR:
cin04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
100178711
Endocytosis
Macropinocytosis
Phospholipase C
100178711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
SH2
EF-hand_PLCG2
PH
C2
SH3_1
PH_12
SH3_9
SH3_2
EF-hand_PLCG1
EF-hand_like
PH_14
EF-hand_7
EF-hand_1
GDPD
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
100178711
NCBI-ProteinID:
XP_018666895
Ensembl:
ENSCING00000004355
LinkDB
All DBs
Position
3:complement(4291580..4313962)
Genome browser
AA seq
1287 aa
AA seq
DB search
MPVQYPNGPTVVHGIVDPKFQNESELQGVLRRLVMGNMMKKIVVRKGKLEERTFQVNLET
RQVVWQRAGVLEGSIDISEIKEIRHGKVSRDFDKLADVSRKLDSAVCFTILYGNEFNLKI
LSIVAKQQSEREVWIRGLSYLVIDTLKSHYTLQVERFLRKEFNQICRRNLITLRTVKAWL
PNVNAKALPTSQLKEMFQEVDIRKRGEIGFEQFVQFYYNLMFSCQKSILTFVQHYSSDRL
RFTAHDFQKFLIQEQKEDWANDINAVKTFMIEYLGDSSRANDSVYFDNKEMMAYLFSKEN
SLWNSKYNEIPDGMLDKPLSQYWISSSHNTYLTGDQFSSESSCEAYARALRMGCRCIELD
CWDGPDGMPHIYHGLTLTSKIKFHDVLKTIREHAFVVSDLPVILSIENHCKLPQQRHMAT
KFVDIFQDMLVRLSVSANEQTLPSPNQLRGKIIIKHKKLSDANRSTEVFIERSTADLTMD
ISNSVKNGMMYFEDPTFKEWNLHYFVLTEDNKLVYTEERQTQPHDDTTSEDGSIDESANN
DRRGSSDTTELHYAEKWYHGQMGRDEADQLLRDYNGKDGSFMVRESATFIGNCTLSFMYH
GRVTHCRIHSQQNNGHTYFYLVHALLFDSLYSLVWHYQRYPLRNAKMNFELLLTEPVPQP
NAHANKEWYHDSMTRTDAENVLMRIPRDGAFLVRKCRSDDPSVTSFAISFRADGKIKHCR
IKQESRLFVIGNATFETLCDVISFYEKNPLYRKMKLKHPATKEQVQCLLQEPNFYSEDHG
AVGGSVAYVPPNFMSVTVKALYDYRAARDDELTFCKHAIISNVIKQDGGWWRGDYGGKAG
MWFPSNYVEEMESASKEPGSTNLDDAKTGTNVLGDMQKGVIDLANSNIELLPSGRGHQKH
AFRICRSNGDQLHLATETKDDLVSWLNNLKEAIDKHDSQAKKWKDIEKHTRIAVELSDLI
VYCRPVQFNENAKGHCYEMSSFPESKAERYACRDKARIFINYNRKQFSRIYPKGSRVESS
NYNPMPFWNCGTQLAALNFQTGDRSMQLNEARFEMFNRCGYVLQPQFFENELYHPYNKGN
IQGVEPLIMNIQVIGARHLPKSGRGLACPFIEVEIIGCDYDDGKVKTPKKDDNGLNPTWD
NSSSTNNDSSFDFDILVPDTAFLRFTVYDQDMFGDPNFLAMASIPVPCVKSGLRSVPLKN
TYSEDIPLAALLVHLDVRSAKEEDDGLYDSIQRLRDQTKELQSKISSQQSYNPTDMMSYH
QQLCETQKALFMQNEQRKERMIQRLRH
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgccggtccaatatccaaatgggccaaccgtggtacatggaatcgtggacccaaagttt
caaaatgaatctgagttgcagggtgtcttgcggcgtctggtcatgggaaacatgatgaaa
aaaattgtggttcgaaaaggaaaattagaggaacgaacatttcaagttaatctggaaact
cgacaagttgtttggcagcgtgcaggagtgctagaagggtcaattgatattagtgagata
aaagaaatccggcatggcaaagtttcacgagatttcgacaaactcgcagatgtttctcgc
aagttggattctgcggtctgctttacaattctgtatggaaacgaatttaatctcaagatt
ttatcaatcgttgctaaacaacagagcgagcgtgaggtgtggatccggggtttgtcttat
cttgtaatcgatactttgaagtcacattacacacttcaagttgagaggttcctaagaaag
gaatttaaccaaatttgccgcagaaacttaatcacattaaggacggtgaaagcttggctt
cctaatgttaacgccaaagctctgcccacatcacagctaaaggaaatgtttcaggaagta
gacataagaaaaagaggggaaattggttttgaacaattcgttcagttttactacaacctc
atgttcagttgccagaaaagcatcctcacttttgtgcagcattattcttcagacaggtta
cggttcactgcacacgattttcagaagtttctgatccaagaacagaaagaagattgggca
aatgatataaacgcggtgaagaccttcatgattgaatatcttggtgattccagtcgagca
aatgattcggtgtattttgataacaaggagatgatggcttatctattctcgaaagaaaat
tctttatggaattcaaaatacaatgaaatccctgatggaatgttggacaaaccattatct
caatattggatttcttcttcacataacacatacttgactggtgatcagttcagtagtgaa
tcttcatgtgaagcgtatgcacgtgcattaaggatgggatgcagatgcattgagttggat
tgctgggatggtccagatggcatgccacatatataccacgggctaaccctcacatccaag
attaagtttcatgatgttttgaagacaattcgtgaacatgcctttgtggtgtcagacctt
cctgttatcctttctattgagaaccattgtaaattacctcagcagagacatatggcaact
aagtttgttgacatatttcaagacatgttagttcgattatctgtgtctgcgaatgaacaa
acccttccctcacccaaccaacttagaggaaagataattatcaagcataagaagttaagt
gatgcaaacagatcgactgaagtattcatagaacgaagtacagcagacctgacaatggat
atcagcaactcagttaagaacggtatgatgtattttgaagacccaacttttaaggaatgg
aaccttcattattttgtcctcacggaagataataagttggtttatacggaggaacgacaa
acgcaacctcatgatgacacaacgtccgaggatggaagcatagatgagtcagcaaataat
gatcgaaggggtagttctgacaccactgagctccactatgcagagaagtggtatcatggg
cagatggggagggatgaagctgatcaattacttcgtgattataatgggaaagatggttca
tttatggtgagggaaagtgcaaccttcattggaaactgtacattatctttcatgtaccac
gggcgtgtcacacactgcagaattcactcgcagcaaaacaacgggcatacatacttctac
cttgttcatgctctcttgtttgatagtttatacagtttagtatggcactaccagcgctac
ccgctcagaaacgccaagatgaattttgaacttttactgactgaacctgttccgcaaccc
aatgcacatgctaataaagaatggtaccatgacagcatgacacgaacggatgctgagaat
gttttgatgagaattccccgtgacggagctttccttgtgaggaagtgtcgatctgatgac
ccttcagtgacctctttcgctatttctttcagagctgatggaaagataaaacattgtcga
ataaaacaggagtctcgcttgtttgtgatcggaaacgccacatttgaaactttgtgcgac
gttatttcattctatgagaaaaatcctctttatagaaaaatgaaattgaaacacccggca
actaaggaacaagtgcagtgtctgttacaggagcccaacttctacagtgaagaccacgga
gctgtaggtggaagtgtggcttacgtaccccccaactttatgtcagtaacagtgaaagct
ttgtacgactaccgagccgcacgtgatgatgaacttactttctgtaaacacgccatcata
tctaacgttattaaacaagatggcggatggtggcgaggggattatgggggaaaagcagga
atgtggttcccaagtaattatgtggaagaaatggaatctgctagcaaagaacctgggagt
actaacttagatgacgctaaaactggcacaaacgtacttggagacatgcagaaaggagtc
attgatcttgctaactctaatatagagctgcttccatctggaaggggccaccagaaacat
gcgtttcgtatttgccggtctaacggggaccagcttcacttagcaactgaaactaaagat
gatctcgtttcttggttgaataatttgaaagaagcgattgataaacatgattcgcaggca
aagaaatggaaggatattgagaaacacacaaggattgctgttgagttgtcagatctgatt
gtttattgtcgacctgtccaattcaatgaaaacgcaaagggccattgttacgaaatgtca
tccttccctgaaagcaaagcagagcgatatgcatgtcgcgataaagcaagaatattcatc
aattacaacagaaaacaattctcaagaatttatccgaagggatcacgagtagaatcatcc
aactacaacccaatgccattctggaattgtggaacccaacttgctgctcttaactttcaa
actggagaccgttctatgcagttaaacgaggcaaggtttgagatgtttaacagatgtgga
tacgttctacagcctcagttctttgagaatgaactttatcatccgtataataaaggaaat
atacaaggagttgaacctcttataatgaacatacaggtaataggagctcgccatcttcca
aaatccggtcgtgggttggcttgcccattcattgaggttgagattattggatgcgattat
gatgatggaaaagttaaaacaccaaagaaagatgacaatggtttaaacccaacatgggac
aacagcagtagcacgaacaatgatagttcttttgattttgacatcctggtaccagacaca
gccttcttaaggttcactgtgtatgatcaagatatgttcggcgatccaaactttctggcc
atggcgagcataccggtgccttgtgttaagtctggtctaaggtctgttccactaaaaaac
acatacagtgaagacatcccgcttgctgctttgctggttcatctggatgtgagaagtgcc
aaggaagaggatgatggcctgtatgactcaattcaacgcctcagagaccaaaccaaagaa
cttcaatctaaaataagcagccagcaatcttacaacccaacagacatgatgtcataccac
caacaactgtgcgagacacagaaagcactttttatgcaaaatgaacagagaaaggaaagg
atgattcagcgtctaaggcattga
DBGET
integrated database retrieval system
