Ciona intestinalis (yellow sea squirt): 100178957
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Entry
100178957 CDS
T01056
Name
(RefSeq) centrosomal protein of 290 kDa isoform X1
KO
K16533
centrosomal protein CEP290
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100178957
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100178957
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
100178957
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
100178957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
FliJ
CC4_CEP85
XLF_CC
Motif
Other DBs
NCBI-GeneID:
100178957
NCBI-ProteinID:
XP_009861312
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MKELNERQRADHATKMYNKLKSSLNELENRNSELDQKFSELTKMNMEAQKTERDLRDELA
EVVPRSVSDADRKKMVLLQEDLVKTKLKMSKLQDIAEISRNQLQSVQSQQQARDRELKSL
RQQLKTFQHQTDNNALIGQLHHQVLTLQASESDLERKLSNTRQDVIKLKAKLFKAEKLTD
EKEDAVYLTRAECNTKIRNLRKTIQSLRQQFSGALPISQQEKFAKTMIRLRGDKKLVEEE
MRKMRIEREKLEDQLLEAEVRKKGLEDLRRAIEDKRGADQLTEWCRKMDGLRLKDMKLQR
QVTRQNEQISYMERLNNQHENTISSLEEDIVQMLKVQEDHQVEWESRESELERLLDQFQN
QQREVNKRAKKLDDFSEILPQTSLSVEDQLKKALETIKEQRKTMTNLQAQVKNLEFESDR
LKDARHALEGDITSRDRIINELRLHMPTTVVLPEPHTTDNESKQQLDVAINTIETLKKRL
SAKEQSIERYKELLEESRRDHEMMSAAHERDLLLMQNKIHVKTDDAFNKFKQAATSASQP
PGSSAPSASDLRHLNELEDMVREQDAAMSALMERVRSSNADISRHKRALLDTKKQHEAEK
MKMQETHDVMLNALRMKLAKKHKQVEATTTELSVTKEELKRQKDANTRAPAASMKNLVQR
LKEELAEKEKQQQQLSHALKELRVDLVQQAQENVRAATAGEADTHNVTILVEKRTAHYKD
DIEDLKDEIAQLRRNLKQSEKTETTLKSELRKTLEEAEKKSQVIQRLKSDLHTKETESKD
LREKMKRLLRNKGPDAGIKFGEDQPLKIKLSEGRKVEEDEIKPVDAGTKNLSRPSSASSK
LPRSVYSSQDGEKNEKLKSEIVNLKREVENLKEKLKKKTEIPDKTTLEVAKWDVKKQWQS
KVESLKSKLQDAEKQVTAQDKQIAALRVANSRLEKEKLRKPVIPLNQYTDDAAPPNGLEV
KQHLHTIEELSSRLHDLGEENSDLKKMTTLPKNKLITEMQMKNQHLSNQMQDLQKELLTA
GLRHETDETLASQFEDRENRMQGRILQLASENTQFQFEIEQIKHDVPRLQERVEFQQRFI
NLLKSEKAELQQRVDKLLIQRKGPDVGGSGKNIQELEKTVVLMKKVVERVQRENEDLKKA
PGVVSNQLLEQLKSENQLLKNRINEMTQQIGGQLSLRYESKTQSVEKLMKENEKLRKDLN
KNATTRDRIRDSKQVLQAEYNKLTKDFEEVKKKLTVAESKAPKFAGSGSKGYNSAITSRM
LESKLRKTEADLEKKTKEVGGLKDVLEDQRMQENKLNKDVERLQEQVEVLERFPLGAGGS
DPNTVRELQLTRLTVARLENEKEELNHLIKTANQKLRNHGLDENGPSTSEQEKEINTTKA
ENVRLGTEMLILRKENEKLTQDIERMREELSHFDGEFFDEIEDLKYNYSECIKKNVAYEE
QLRALSQQFGVAFEIPSSDD
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactaaacgaaagacagcgagcagaccatgccacaaaaatgtataataaactc
aagtcttcactaaatgaacttgaaaacagaaattctgaactagatcaaaaattcagtgaa
ttgacaaaaatgaacatggaggcgcagaagacggaacgagatcttcgggatgaacttgca
gaggttgttcctcgatctgtaagtgatgctgatcggaagaagatggttcttcttcaggaa
gatctcgtgaaaactaagcttaagatgtccaaactacaagacattgctgaaatttctcgg
aatcaactacaaagcgttcaatcgcaacaacaagcgagagacagggagttgaaatcgtta
cgtcaacaattaaaaacgtttcaacatcaaacagataataacgcattaattggccaactg
caccaccaagtgttgacattgcaagcgagcgagtcagatttggaacgaaaattatcaaat
acaagacaggatgttattaaattgaaagcgaaactttttaaagctgaaaaactcactgac
gaaaaagaagatgcggtttacctcacaagagcagaatgcaacacaaaaatcagaaattta
cgaaaaaccatccagagtttgcggcaacagttcagtggtgctttgccgatttcacaacaa
gaaaaattcgccaaaactatgatacgattgagaggagacaaaaaattggttgaagaagaa
atgagaaagatgagaatcgagcgcgagaagcttgaggatcagctcctggaggcggaagtc
cggaagaaaggactggaggacctaagaagagcaattgaggataaacgaggagcagaccag
ctgacggaatggtgtagaaaaatggatgggctcagattaaaagacatgaaattacagaga
caggtgacgcggcaaaatgagcagatttcttacatggaaagattaaacaaccaacatgaa
aacactatttctagcttggaagaagacattgttcaaatgttaaaggtacaggaggaccac
caggtggagtgggagagcagagagagcgagttagaacgattactcgaccaatttcaaaat
caacaacgcgaagttaataaaagagcaaaaaaattggatgattttagcgaaattttgcct
caaacgtcactttctgttgaagatcaattgaaaaaagctttggaaacaataaaagaacaa
agaaaaacaatgacaaatctacaagcgcaagttaagaatcttgaatttgaatcggatcgt
ttaaaagacgctcgacacgcacttgagggcgatataacgtcacgtgatcgaattatcaac
gagttgcgacttcacatgccgactactgttgttctgccagaacctcatacaacggataac
gaatcaaaacaacaactcgacgtggcaataaacacgattgaaactttaaagaaaagatta
tctgctaaagaacaaagtatagaaaggtataaagaattgcttgaagaatcgcgcagagat
cacgaaatgatgtcagcagctcatgagcgtgatttgctgctcatgcagaacaagattcac
gtgaaaactgatgacgcattcaacaagtttaaacaggcagctactagcgcctcccaacct
ccaggatcgtctgctccctccgcatccgatcttcgtcatctaaacgagttagaagacatg
gttcgcgagcaagatgctgcaatgtcggctcttatggaaagagttcgatcgtcaaacgcg
gatatttctcgtcacaagagagcgctgttggacaccaagaaacaacatgaggcagaaaaa
atgaaaatgcaagagacacatgacgttatgttaaacgcattacgtatgaaactcgcaaag
aaacataaacaagttgaggcaacgacaacggaattatcagtcacaaaagaagaattgaag
agacagaaggatgcgaacacccgtgcccctgccgcatccatgaaaaaccttgttcagcgt
ttaaaggaagaacttgctgaaaaagaaaaacaacaacagcaattaagccatgcgttaaaa
gagctacgtgttgatctggtgcagcaggctcaagaaaacgtacgagcggcaaccgccggc
gaagctgacactcataatgttacaattctcgtggaaaagagaacagctcattataaggac
gacattgaagatttgaaagacgaaattgcccagcttcgtcgaaatttaaaacaatcggaa
aaaacggaaactactcttaaatctgagctccggaagactttagaagaggcagagaagaag
agtcaagtcatccagagattaaagtccgatctccacacgaaggagacagagagcaaagat
cttcgcgagaagatgaagaggttgcttcggaacaaaggtccggatgcggggatcaagttt
ggggaggatcaacctctaaagatcaaattatcggaagggagaaaagtggaagaggatgag
atcaaacctgtggatgcagggaccaaaaatttgagtaggccaagctctgcaagttcaaag
ttaccaagatcagtttattcaagtcaagacggagaaaaaaatgaaaaattaaaatcggaa
atcgtgaatttgaaacgtgaagtggaaaatctaaaggaaaaattaaagaaaaaaacagaa
atccctgataagaccacactggaagtagcaaaatgggatgttaaaaaacagtggcaatcc
aaagttgaaagtttgaaatctaaactccaagacgcagaaaaacaagtaacagcacaagat
aaacaaatcgctgcactgcgtgtcgcgaattctcgcttggaaaaagaaaaacttcgaaaa
ccggtaattcccctaaaccaatacacggatgatgcagcgccacctaatgggctcgaagta
aaacaacatctgcatactatcgaggaacttagcagtcgtctgcatgatcttggagaggaa
aacagcgacttgaaaaaaatgacgacacttcctaaaaacaaactaataactgaaatgcaa
atgaaaaaccaacacctttcaaatcaaatgcaagatttacaaaaagagttattaactgca
ggattacgtcatgaaacggacgaaacgcttgcgtcacaatttgaagatagagaaaaccga
atgcagggtcgtattttacaactggcgtccgaaaatacacagtttcaattcgaaattgag
caaattaaacatgatgtgccaagactacaggaaagagttgaatttcaacaacgttttatc
aacttgttgaaatccgagaaagctgaacttcaacaacgcgttgataaactattaattcaa
cgaaaaggtccggatgttgggggaagtgggaagaacatccaagagctagagaagacagtt
gtcttgatgaagaaagtcgtagaacgagttcaacgagaaaatgaggatttgaaaaaagct
cccggcgtcgtgtctaatcaattacttgagcaacttaaatccgaaaatcaacttttaaaa
aaccgtattaacgaaatgactcagcaaattggagggcagctaagtttacgatatgaaagt
aaaacgcaatcagttgaaaaattaatgaaagaaaatgaaaaacttcgaaaagatttgaat
aaaaatgctacaacaagggacaggataagggactcaaaacaagttttgcaggcagagtat
aataaactgactaaagattttgaagaagttaagaaaaaacttacagtggcagaaagcaag
gctcctaagtttgctggcagtggcagtaaaggctataactctgctattacaagcagaatg
ttggaatcaaaacttcgtaagacggaagcggatttagagaagaagacgaaagaggttgga
ggattaaaagatgtccttgaagatcagaggatgcaggaaaataaacttaataaagatgtg
gaaagattacaagagcaggtggaagtactcgagaggttcccgcttggagccggcggttct
gatcccaacactgtacgtgaactgcaactaacaaggcttactgtcgcgcgattggagaat
gaaaaagaagaacttaatcacctgattaaaacagccaatcaaaagctccgaaatcatgga
ttagacgaaaatgggccaagcacgtcagaacaggaaaaggaaataaacacaacaaaagca
gaaaacgtaagacttggaacagaaatgctcattttgagaaaagagaacgaaaaattgacg
caagatatagaaagaatgagagaagaactctcgcattttgatggtgaattttttgacgaa
attgaagacctaaaatataactattcagaatgtatcaagaaaaatgtggcttatgaagag
caattacgtgcgttgtcacaacaatttggggtcgcatttgagatcccttcttcagatgat
tag
DBGET
integrated database retrieval system
