Entry |
|
Name |
(RefSeq) integrator complex subunit 4
|
KO |
K13141 | integrator complex subunit 4 |
|
Organism |
cin Ciona intestinalis (yellow sea squirt)
|
Brite |
KEGG Orthology (KO) [BR:cin00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:cin03041]
100179081
Spliceosome [BR:cin03041]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
100179081
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
12:complement(2048237..2082318)
|
AA seq |
976 aa
MAVHLKKRAYEEFSHVIQESPKPQVKRLKITKLPKVGQSSSRFEDLELQLDGQSSANVLQ
KLLKLSKKLPIPAEHVQPCLEILFNQFHVETDTAVRTKIAWLIGKLCCTLGFYPVKAIQN
VMELLDTEVSGKVLTQLWTTVLKIATRLSEETNLHRQIVDMACVGLRDYHQEVRCACLKV
IGSLASNKQITKPSAEKKWDQVNIHTLVADYFGDPEPRVRSSSLAALIEMHQRGQQLEMP
VYEQACSALHDDYERVRFLAVELVWIMSHIYPENMVKAPYSDEKLRLVDDAFAYICNMFN
DSSYKVRAEAARLLGSMHLVSDSFLFQTLDKKLMSDLRRKKSLNEQAKEGFVEEFSSGAK
WADDAPIKDHNPDSNMLMSSGACGAFVHGLEDEMMEVRSAAVDSLTELASQRSSSSFAQA
ALDFLVDCLNDEIEAVRLNAVNSLHKIVEHVTLLEDQLDNVHSAMEDACKDIREGIHQLL
SSCRLMSKACLYDTVMMLLKNLSKYPQDRRSIWRTQQHVGKRHSELVYLLVPQLLSCHPF
FATSEPEMDDPSYIAILILVFNAAESCPSMTQLFPEHVVRHYQYLRDSIPDLVPQNIKLT
SFTVGADSCHVAIPSTSKTSRCPANFISRTMDRVKNLQVYEPSEQRKLLDCTIRDLRHAA
DVAPSLASTAQCSADYLQAQLLLSKAVDTRSWTGSSHICAQHTAFAKPAANQIIQLTKEL
EHLYLGLSTNEIALVLQLRLKAQALLFVLEMQEATLSRKNKSQSSGEKPLKPSKLCEEFF
HRVQELKSILEKSDIAPDSFSRTLFNELLKLSASRKPSLVVKLLQPLLSHYSASEVDLNN
KVQKSRVIIHEPQPNPDSPVVISAGLVAALNVDAVAENLTNPLHEIRIQVIYPDSTSQLF
NLSPQDVKQSTPFKHKISTKIYLSHEQWSEACVVKLLFVKIVRAPLDVKHNTTTSETLPL
SKAVEVTFHPKPASRA |
NT seq |
2931 nt +upstreamnt +downstreamnt
atggctgttcatttgaagaaaagagcttatgaagaatttagccatgtaatacaagaatca
ccaaagccacaggtaaaacgattaaagatcacaaaactaccaaaagttggtcaaagttca
tcaagatttgaggatctcgagttacaactggatggacagagctcggcaaatgttttgcag
aagttgctcaaactttccaaaaaacttccaattcctgccgaacacgtccagccgtgttta
gaaattttgttcaatcagtttcatgttgaaacagacactgctgttcgcactaaaatagct
tggttgattgggaaactatgttgcactttaggattttatcctgtcaaagctattcagaat
gtaatggaactgctagatactgaagtatctggtaaagttctgacacaactatggacgact
gtgttgaaaattgcaactcgtctgtcagaggaaactaatttacatcgacagattgtggac
atggcttgtgtggggttgagagattatcatcaagaggtaagatgtgcatgtctcaaagtt
attgggagccttgcatcaaacaaacaaatcaccaaaccttctgctgagaaaaaatgggac
caagtgaacatccacacacttgttgctgattattttggagatccagaaccgagagtaaga
agtagctctcttgcagctctgattgaaatgcaccagcgtggacagcagttggagatgccg
gtatatgaacaagcatgttctgccttacatgatgattatgagagggttagatttcttgct
gtggaacttgtgtggattatgagtcacatttacccagaaaacatggttaaagctccttat
tctgatgagaaactccgtttggtggacgatgcgttcgcttacatctgtaatatgttcaat
gacagttcttataaggtaagagcagaagcagctcgtctacttggttctatgcatctcgtg
agcgattcatttctgtttcaaactctcgacaaaaaactgatgtcagatttgcggaggaaa
aaatctttgaatgagcaagcaaaagaaggttttgttgaagagttttcttccggagcaaaa
tgggcggatgacgctccaatcaaagatcacaatccggactcaaatatgctgatgagcagt
ggagcttgtggagcgtttgttcatggtctggaagatgaaatgatggaggttagaagtgca
gcagttgattcactcacagagctcgcatctcaaagaagcagttcttcatttgctcaggct
gcgttggatttcctggtggattgcttgaatgacgagattgaagctgtgagacttaacgct
gtcaactccctgcacaaaatagtggagcacgttacactgcttgaggatcaactagacaac
gtacactcagccatggaagatgcttgtaaagacatcagagaaggaattcatcaattactt
agcagttgcagattgatgtcgaaagcttgtttgtacgatacagtgatgatgttgcttaaa
aacttatcaaaatatcctcaagacagaagatcaatttggaggacccagcagcatgtgggg
aaacgacacagtgaacttgtttatcttctcgtaccacagttgttgtcttgccatcctttc
tttgcaacatctgagcccgagatggatgacccaagttacattgccatcttaatcttggtt
ttcaacgcagctgagtcatgcccttctatgactcagctgtttccggagcatgtagttcgt
cattatcaatatctgagggacagcatacctgatcttgtgccacagaatatcaagctcacc
agtttcacagttggtgcagattcatgccacgtggcaataccttctacatcgaaaacttct
cgatgtccggctaactttatctcgcgtactatggacagagtcaaaaacctgcaggtatat
gaaccttcagaacaacgtaagttactcgattgcacgattcgtgatcttcgtcacgcagcg
gatgttgctccttccctcgcgtccaccgctcagtgctcggcagattatctacaagctcaa
cttctcctctcaaaagctgtagatacgagaagttggacaggttcaagtcacatatgcgct
caacatacagcattcgctaaacctgcagcaaatcaaatcatccaactcactaaagaactt
gagcatctttacctaggcttaagcacgaatgaaatagctttggttctccaactgcgactt
aaggcacaagctttgctgtttgtattggaaatgcaagaagccactttgagtagaaaaaac
aaatcacaatccagtggtgaaaaaccattgaaaccaagcaagctgtgtgaagaattcttc
catagagtccaggaacttaaatcaatcctcgagaagagtgacattgctccggactcattc
agccggactctttttaacgaacttcttaagctttctgcgtcgagaaaaccttctcttgtc
gtgaaactcctgcaaccactcttgtcgcattacagtgcttcagaagtagatttgaataac
aaggtccagaagtcacgagtcatcatacatgagccacaacccaaccctgattcacctgtg
gtcattagtgctgggttggtggctgcacttaatgttgatgcggttgctgaaaatctaact
aacccgctccatgaaataagaatccaagtaatatatcctgactccacgtctcagttgttc
aatctttcaccacaagatgtgaaacaaagcactccatttaaacataaaatatctacaaag
atatatttaagccatgagcagtggagtgaggcgtgcgtcgtgaaattacttttcgttaaa
atcgttcgtgcaccgttggatgtcaaacataacacaacgacatcagaaacccttccgtta
tcgaaggcagttgaagtcacttttcatccaaaaccagcttcaagagcttaa |