Ciona intestinalis (yellow sea squirt): 100179361 Help Entry 100179361         CDS       T01056                                  Name (RefSeq) methionine synthase   KO K00548   5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin00270   Cysteine and methionine metabolism cin00450   Selenocompound metabolism cin00670   One carbon pool by folate cin01100   Metabolic pathways cin01230   Biosynthesis of amino acids cin04980   Cobalamin transport and metabolism cin04981   Folate transport and metabolism Brite KEGG Orthology (KO) [BR:cin00001]  09100 Metabolism   09105 Amino acid metabolism    00270 Cysteine and methionine metabolism     100179361   09106 Metabolism of other amino acids    00450 Selenocompound metabolism     100179361   09108 Metabolism of cofactors and vitamins    00670 One carbon pool by folate     100179361  09150 Organismal Systems   09154 Digestive system    04981 Folate transport and metabolism     100179361    04980 Cobalamin transport and metabolism     100179361 Enzymes [BR:cin01000]  2. Transferases   2.1  Transferring one-carbon groups    2.1.1  Methyltransferases     2.1.1.13  methionine synthase      100179361 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding Motif Other DBs NCBI-GeneID:  100179361 NCBI-ProteinID:  XP_002119268 Ensembl:  ENSCING00000023410 LinkDB All DBs Position 4:4732220..4743527 Genome browser AA seq 1259 aa AA seqDB search MAGLATYSEIESTLQKRIMIFDGGMGTMIQNLRLEEEDFCGDRFKDHSKPLKGNNDLLSL TKPESIYEIHKAYLEAGADFIETNTFSGTSIAQADYALEHVVYELNYESAKIAKRAARDV SNATGVKRYVAGSVGPTNKTLSVSPSVEKPEYRNITFDELVTSYSEQVRGLLDGGADVLL VETIFDTANAKAGLFAIQVVLDDEKYAPLRGIPIFVSGTIVDKSGRTLSGQTGEAFVVSV SHAKPMCLGLNCALGAVEMRPFIEVIGNFTDRYVICYPNAGLPNTFGGYDETPQTTAKYL AEFAASGLVNIVGGCCGTTPEHIRAIANAVKIHKPRVPPHDPHKGCLLLSGLEPAIISSL TNFVNIGERCNVAGSRRFARLIQNGKYESALDVARSQVEMGAQILDINMDEGMLDGGVVM PKFINLIGSEPDVSKVPLCIDSSNFNIVVAGLKTTQGKCIVNSISLKEGEEDFVEKAKLI LRFGAAVVVMAFDEEGQATSSEDKVRICTRSYRILVDQVGFNPNDIIFDPNILTIGTGME EHNEYAIHFINATRIIKQTLPGCRISGGLSNLSFSFRGMETIREAMHSVFLFHAITAGMD MGIVNAGNLPVYDDIPADLLKLCEDLIWNKDPDATEKLLKYAQDYGKSGSKSVESEEWRS WEVEERLQHSLVKGIDKYVIEDTKECQQNTVRYPRALNVIEGPLMKGMGVVGDLFGAGKM FLPQVIKSARVMKKAVGYLIPIMEEEKKLRYKEMEKMGMECVEEDRFAGTVVMATVKGDV HDIGKNIVGVVLGCNNYRVIDLGVMTPCDKILQTALENKADIIGLSGLITPSLSEMIHVA KEMERQDMKIPLLIGGATTSRTHTAVKISPRYNQPTIHVLDASKSVVVISSLLNDDLRME YLDEIKEEYEEVRMDHYDSLLERKFLSLEQTRNKKLMIDWTTSGITEPTFLGNKVYHEYH IEKLLQYIDWKPFFDVWQLRGKYPNRGYPKIFKDKTVGEEALRVFNDAQVMLRKIIDEDL YQMEGVVSFFPANSVGDDIHVYADDVMPRPTTPLAVFYGLRQQAEKEWESVEPYYCLSDF IAPRVSGVRDYIGMFAVSCFGARELCKQYEDNMDDYSSIMAKAVADRLAEAFAEALHELV RTTLWPYSSNEQLEAGDLHKIKYQGIRPAPGYPSQPDHTEKLTMWDVMKVEETIGTKLTG SLAMDPPASVSGLYFANEKATYFAVGKICEDQVADYASRKGCTKAEIEEWLSPILSYDS NT seq 3780 nt NT seq  +upstreamnt  +downstreamnt atggccggtcttgcaacatattctgaaattgagtccaccctccagaagaggatcatgatc tttgatggagggatggggacaatgatccagaacctccgtttggaagaggaggacttttgt ggggacaggtttaaagatcattccaaaccactgaaagggaataatgatcttttatcattg accaaacccgaaagtatttatgaaatacacaaggcatatttagaagctggtgctgatttc attgaaacgaacacattcagtggaacaagtattgctcaagctgactatgcacttgaacat gtggtgtacgaacttaactatgagtcggctaaaattgcaaaacgagctgcgagagatgtc tccaatgctactggggtgaagcggtatgttgctggtagtgttggaccaaccaataaaact ttgtctgtttcaccatctgtggagaaacctgaatatagaaacataacctttgatgaactg gtgacttcatactctgaacaagtgaggggtttattggatggaggtgcagatgttttgttg gtggaaactatattcgatacagctaatgcaaaggccggtttgttcgccattcaagttgtt ttggatgacgaaaagtatgctccattaaggggaatacccatatttgtatcaggcaccata gtagacaagagtggtcgaacattatctggccaaactggggaagcatttgttgttagtgtc tctcatgctaaacctatgtgcttgggattaaactgtgcactaggggcagtagagatgcgt ccgttcattgaagtgatcggaaacttcacggatagatacgtgatatgttatcctaatgct ggtcttcctaatacatttggtggatatgatgaaactccacaaacaacggccaagtatcta gcggagtttgcagcttcagggttggtaaacatagttggtggatgttgtggtacaactcct gaacatattcgtgctattgctaatgctgtgaagatccataaacctcgtgtacctcctcat gacccacataagggatgtttactgttaagcggtcttgaaccagccatcataagttcgctc acaaacttcgtaaacatcggtgagcgttgcaatgtagcaggatctcgtagatttgctcga cttattcagaacggaaagtacgagtcagcactagatgtcgctagatcacaagtagagatg ggagctcagatcctggacataaacatggatgaagggatgttggatggaggagtggtgatg cctaagtttatcaacctcatcggatcagagccggatgtttcaaaggttcctctctgcatc gattcatccaactttaacatcgtagttgccgggttaaaaaccactcagggcaaatgtatt gtgaacagcatcagtttaaaggagggagaagaagattttgtggagaaagcaaagttgatt cttaggtttggtgcggctgttgttgtcatggcgtttgatgaagaagggcaggcaacgtct tcagaagacaaagttcgtatttgtacaaggtcgtaccgaatattagtcgaccaggttggt ttcaatccaaatgacatcatttttgatcccaacattctgacaattgggaccgggatggag gagcataatgagtatgcaatccacttcatcaatgccacccgcatcatcaagcagacactc ccaggatgtaggatcagcggaggactctcaaatctatcattttcattcagaggaatggag acgatcagagaagcgatgcattcagtttttctcttccatgcaatcacagctggtatggac atgggtatagtgaatgccggtaaccttcctgtatatgatgacatacctgctgatttactc aagttgtgtgaggatcttatttggaacaaggatcctgatgcaaccgagaagttgttgaaa tatgcgcaggattatgggaagagtgggagcaagagtgttgagagcgaggagtggaggagt tgggaggtggaggagaggttgcaacattcgcttgtcaagggaattgacaaatatgttatt gaagacaccaaagaatgtcagcaaaacacagtgagatatccaagggctcttaatgtcatt gagggaccattaatgaagggtatgggagtggtaggagatttattcggcgctgggaaaatg tttttaccccaggttatcaagtcagctcgtgtgatgaagaaagcagttggatacctcatc ccgatcatggaagaggagaaaaagttgagatacaaagagatggagaagatgggaatggaa tgtgtagaggaggatcgatttgccggcactgttgtcatggcgactgtaaaaggtgacgtg catgacatcggcaaaaacatcgttggcgtcgttctcggttgtaataactaccgagtcatt gatcttggggtcatgaccccttgcgacaaaatcttacaaacagcgttggaaaataaagcc gacatcatcgggttatcagggctaatcaccccttcgttgtccgagatgattcatgtggcc aaggagatggaaagacaagatatgaagatccctctcctgattggtggagccaccacatca cgaactcacacagccgtgaagatctcaccaagatacaaccaacctactatacatgtgctt gatgcttctaagagtgttgttgtgatatcatctttgttaaatgatgatctgaggatggaa tatctggatgagataaaggaggaatatgaagaagtgaggatggatcattatgattcactc ctggaacgaaagttcctttcactggaacaaacaaggaataaaaagttaatgatagactgg acaacatctggcatcactgaaccaacttttcttggtaataaagtttaccatgaatatcat attgagaaacttcttcaatacattgattggaaacctttctttgatgtttggcagctaagg gggaaatatcccaatcgaggatacccaaaaatatttaaagataaaacagttggtgaggaa gctcttagagtgttcaacgatgcacaagtgatgctacggaagattattgatgaagattta tatcagatggaaggagttgtaagcttctttcccgccaactcagtgggtgacgacatacac gtgtacgctgatgatgtcatgccaagacctacaacccctcttgctgttttttacgggtta agacaacaagcagaaaaagaatgggaatctgtcgagccttattattgtttatctgatttc attgcaccacgtgttagtggtgtgagggattacattggtatgttcgctgtctcgtgtttt ggagcaagagagttatgtaaacaatatgaagataacatggatgactacagcagcatcatg gctaaggctgttgctgatcgattggccgaggcgtttgctgaagctttacacgagcttgtt cgtaccaccttgtggccatattcatccaacgaacaattggaagccggagacttgcataaa attaaatatcagggaatacgcccagcccctggataccccagccaacctgatcatacagag aaacttacaatgtgggacgtcatgaaagtagaggaaactattggaacaaagttaactggt tcgctcgctatggatccaccagcatcagttagtggattgtattttgctaatgagaaagcc acgtactttgcagtaggaaagatatgtgaggaccaagtggcagactatgcatctaggaaa ggttgtactaaagctgaaatagaagaatggctttcccccatactttcctatgattcataa

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