Ciona intestinalis (yellow sea squirt): 100179548
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Entry
100179548 CDS
T01056
Name
(RefSeq) clarin-3-like
KO
K23841
clarin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100179548
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100179548
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4064
Clarin-2
Phageshock_PspG
Motif
Other DBs
NCBI-GeneID:
100179548
NCBI-ProteinID:
XP_002130009
Ensembl:
ENSCING00000018455
UniProt:
H2XWB7
LinkDB
All DBs
Position
8:complement(3764206..3767790)
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AA seq
235 aa
AA seq
DB search
MNKAFALWTFVTAAAAIGLLATGLGTEEWTIIKITRDANAECVIQRSLGMFNGKDVPSDK
CFAITEEVSHQMFNKSEIAYNSGAQMASLVFILFGILGGLFAMAISAYNIVSKPYETFAG
PIGMISYFTSGLVFTLIGIIIYVVLFYNDFKDSVPEKCPSIDSICHEQGYKTESAELGYS
FYLIVAAIGPFLIGIIIVFAAGNSLKKKIRSVVCPKKFEEEPHSAGEKDVNMMSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcttttgcgttgtggactttcgtgacagcggcagcagcaattggacttctt
gctacaggtttagggacagaagaatggacgataattaaaattacgagagatgcaaatgca
gaatgtgtgatacaaaggtcacttggaatgttcaatggcaaagatgtcccttcagataaa
tgttttgctattacagaagaagtgtcccaccagatgtttaacaaatcagaaatcgcatac
aattctggtgctcaaatggcttcacttgtgtttatcttgtttggaattttgggtggcctt
tttgcaatggccatatctgcttacaatatagtttcaaaaccatatgagacatttgctggt
ccaataggaatgatttcatattttacatctggattggtgttcacattaattggtataatc
atctatgttgttctcttctacaatgacttcaaggactctgtgcctgaaaaatgtccatca
atagattccatatgccatgaacagggctataaaactgaaagtgctgaacttgggtattca
ttttatctgattgttgctgctattggtccatttttgatagggattatcattgtgtttgct
gctggtaacagcctaaaaaagaaaattaggtctgttgtctgtccaaaaaaatttgaagaa
gagccacacagtgcaggggaaaaagatgtgaatatgatgtcattttaa
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