Ciona intestinalis (yellow sea squirt): 100179616
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Entry
100179616 CDS
T01056
Name
(RefSeq) DNA polymerase kappa-like
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100179616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cin03400
]
100179616
Enzymes [BR:
cin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100179616
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
100179616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
POLH-Rev1_HhH
IMS_HHH_1
Motif
Other DBs
NCBI-GeneID:
100179616
NCBI-ProteinID:
XP_002120223
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MDESRKSGTNQLKPHNHPAQLTRMSLNDNKAGMQGLDKEKINKIIMDNTVGSRFYKNEQK
REQQVNARIQKMKEKLNSFTSNQIMTAKQHAEEILSEVENQRDLSRTIIHIDMDAFYAAV
EERDRPELKQKPMAVGGMDMLSTSNYVARKYGVRAAMPGFIAKKLCPNLIIVPTNFDKYR
EVSKETQEIFSEYDENFCGMSLDEAFLDITDHLQKRLIYDQEERTFHYHPTLAPTTTSED
TDDKKSSETFGFSAEEVAKEIRFRIQQKTLLTASAGIAPNTMLAKIGSDLNKPNGQTFFA
PNRDEIMKFIKDFPVRKVNGIGKVTEQLLSSLGVQKCGDIYEMRAELMLLFSATSCSFFF
RMCLGCSSNILEPDGERKSISTERTFSTISNRDELFAKLDELCHSLAADMKKQNVQGKTL
TLKTKNVDFQLHTRSKTINVPMTNYQTIFPVAQELLKQEILNANNKLSLRLMGVGLSKLE
TGTTSAQTSILKFFAGNTKPQSCDKTLSAQTSSSRDHECSNHEPCDENHEDGDPVKQEDM
KNELLQVETSNTDIETFPCPACGTEQVKTTSLLNQHLDACLSSDKTFQQPEIKSSSNFPE
TSNSPRNTANSNLANSNSSSKMLDDASFSCPICCASFQSSKTTLYQFNNHVDSCLSQSTI
RDILKEENGESFKKRSLANHNNNENLSKRRKLISKGDGIEKFFVPL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatccagaaaatctggtacaaaccagttaaaaccgcataatcatcctgctcaa
ttgaccagaatgagtctcaatgacaacaaagctggaatgcaaggattggataaagaaaaa
ataaacaaaattataatggacaacacagttggttcacggttttacaaaaatgaacaaaag
cgagagcaacaagtgaatgcaagaattcaaaaaatgaaagaaaagttaaattcttttaca
tccaatcaaatcatgacagcaaaacaacatgccgaagaaatcttatcggaggttgaaaac
caaagagatttgtctcgtaccataatccatattgatatggatgctttttatgcagctgtg
gaagagagggaccgacctgaattgaaacagaaaccaatggcagttggtggaatggacatg
ctttccacttctaattacgttgcaagaaagtacggagtacgagctgcaatgccaggtttt
atcgcaaaaaagttgtgtcccaatcttatcattgttccaactaattttgacaaatacaga
gaggtaagcaaggagacacaagagatattttctgaatatgatgaaaacttttgtggtatg
agtttggatgaagctttccttgacattacagatcacttgcaaaagcgacttatttatgac
caagaagaacgaacttttcattaccatccaacccttgccccaacaaccacaagtgaggat
acagatgataagaaatcgtcagaaacttttggtttttcagcagaagaagtggctaaggaa
atacgattccgaattcagcagaaaactttgctcactgcaagtgctggcatcgcaccaaac
acaatgcttgctaagattggaagtgatttaaacaaaccaaacggacaaaccttttttgct
ccaaatcgagatgaaataatgaagtttattaaagattttccagtcagaaaggtcaatgga
ataggaaaagtgaccgagcaacttctttcctccctcggtgttcagaaatgtggagatatt
tatgaaatgcgagcagagctgatgttgctcttttcagccacctcgtgctccttcttcttc
aggatgtgtctcggatgttcctccaatatcctggaaccagatggagaaaggaaaagtatc
agcactgagagaacattcagtacaatatcaaatcgtgatgaattatttgccaagctagat
gaactctgccatagtttagctgcggatatgaagaaacaaaatgtccagggaaaaaccttg
actttaaaaacaaagaatgttgattttcagcttcacacaagatcaaagacgataaatgtt
ccaatgacaaattatcaaacaatatttcctgttgcacaggaacttctaaaacaagagata
cttaacgctaataacaaactatcattgcggctgatgggtgttggattatcaaagttggaa
acaggcaccacctcagctcaaacctcaatcctcaaattttttgccgggaatacgaaacct
caaagttgcgacaaaacattgtctgctcaaacaagttcttcccgtgatcatgaatgttca
aatcacgaaccttgtgatgaaaaccatgaagatggcgatcctgtgaagcaggaagatatg
aaaaatgaattacttcaagttgaaacttccaatactgatatagaaacatttccttgccct
gcgtgtggtactgagcaagttaaaactacatcattacttaatcagcatttagatgcttgc
ttgtcttcagataaaacttttcaacaaccagaaataaaaagctcttcaaattttccagaa
acttctaattcaccacgtaatactgctaactcaaacttagcgaattcaaactcttcttcc
aaaatgttagatgatgcttcattctcatgcccaatatgttgcgccagttttcagtcttca
aaaacaacattgtatcagtttaataaccatgttgactcctgcttgagccaatccacaata
agagatattttaaaagaagaaaatggagaatcttttaaaaaacgatcacttgcgaatcat
aataataatgaaaacttatcaaaacgtagaaaattaatttccaaaggcgatggaattgaa
aagttttttgttccactataa
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