KEGG   Ciona intestinalis (yellow sea squirt): 100179616
Entry
100179616         CDS       T01056                                 
Name
(RefSeq) DNA polymerase kappa-like
  KO
K03511  DNA polymerase kappa [EC:2.7.7.7]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100179616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cin03400]
    100179616
Enzymes [BR:cin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100179616
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    100179616
SSDB
Motif
Pfam: IMS IMS_C IMS_HHH POLH-Rev1_HhH IMS_HHH_1
Other DBs
NCBI-GeneID: 100179616
NCBI-ProteinID: XP_002120223
LinkDB
Position
Unknown
AA seq 706 aa
MDESRKSGTNQLKPHNHPAQLTRMSLNDNKAGMQGLDKEKINKIIMDNTVGSRFYKNEQK
REQQVNARIQKMKEKLNSFTSNQIMTAKQHAEEILSEVENQRDLSRTIIHIDMDAFYAAV
EERDRPELKQKPMAVGGMDMLSTSNYVARKYGVRAAMPGFIAKKLCPNLIIVPTNFDKYR
EVSKETQEIFSEYDENFCGMSLDEAFLDITDHLQKRLIYDQEERTFHYHPTLAPTTTSED
TDDKKSSETFGFSAEEVAKEIRFRIQQKTLLTASAGIAPNTMLAKIGSDLNKPNGQTFFA
PNRDEIMKFIKDFPVRKVNGIGKVTEQLLSSLGVQKCGDIYEMRAELMLLFSATSCSFFF
RMCLGCSSNILEPDGERKSISTERTFSTISNRDELFAKLDELCHSLAADMKKQNVQGKTL
TLKTKNVDFQLHTRSKTINVPMTNYQTIFPVAQELLKQEILNANNKLSLRLMGVGLSKLE
TGTTSAQTSILKFFAGNTKPQSCDKTLSAQTSSSRDHECSNHEPCDENHEDGDPVKQEDM
KNELLQVETSNTDIETFPCPACGTEQVKTTSLLNQHLDACLSSDKTFQQPEIKSSSNFPE
TSNSPRNTANSNLANSNSSSKMLDDASFSCPICCASFQSSKTTLYQFNNHVDSCLSQSTI
RDILKEENGESFKKRSLANHNNNENLSKRRKLISKGDGIEKFFVPL
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggatgaatccagaaaatctggtacaaaccagttaaaaccgcataatcatcctgctcaa
ttgaccagaatgagtctcaatgacaacaaagctggaatgcaaggattggataaagaaaaa
ataaacaaaattataatggacaacacagttggttcacggttttacaaaaatgaacaaaag
cgagagcaacaagtgaatgcaagaattcaaaaaatgaaagaaaagttaaattcttttaca
tccaatcaaatcatgacagcaaaacaacatgccgaagaaatcttatcggaggttgaaaac
caaagagatttgtctcgtaccataatccatattgatatggatgctttttatgcagctgtg
gaagagagggaccgacctgaattgaaacagaaaccaatggcagttggtggaatggacatg
ctttccacttctaattacgttgcaagaaagtacggagtacgagctgcaatgccaggtttt
atcgcaaaaaagttgtgtcccaatcttatcattgttccaactaattttgacaaatacaga
gaggtaagcaaggagacacaagagatattttctgaatatgatgaaaacttttgtggtatg
agtttggatgaagctttccttgacattacagatcacttgcaaaagcgacttatttatgac
caagaagaacgaacttttcattaccatccaacccttgccccaacaaccacaagtgaggat
acagatgataagaaatcgtcagaaacttttggtttttcagcagaagaagtggctaaggaa
atacgattccgaattcagcagaaaactttgctcactgcaagtgctggcatcgcaccaaac
acaatgcttgctaagattggaagtgatttaaacaaaccaaacggacaaaccttttttgct
ccaaatcgagatgaaataatgaagtttattaaagattttccagtcagaaaggtcaatgga
ataggaaaagtgaccgagcaacttctttcctccctcggtgttcagaaatgtggagatatt
tatgaaatgcgagcagagctgatgttgctcttttcagccacctcgtgctccttcttcttc
aggatgtgtctcggatgttcctccaatatcctggaaccagatggagaaaggaaaagtatc
agcactgagagaacattcagtacaatatcaaatcgtgatgaattatttgccaagctagat
gaactctgccatagtttagctgcggatatgaagaaacaaaatgtccagggaaaaaccttg
actttaaaaacaaagaatgttgattttcagcttcacacaagatcaaagacgataaatgtt
ccaatgacaaattatcaaacaatatttcctgttgcacaggaacttctaaaacaagagata
cttaacgctaataacaaactatcattgcggctgatgggtgttggattatcaaagttggaa
acaggcaccacctcagctcaaacctcaatcctcaaattttttgccgggaatacgaaacct
caaagttgcgacaaaacattgtctgctcaaacaagttcttcccgtgatcatgaatgttca
aatcacgaaccttgtgatgaaaaccatgaagatggcgatcctgtgaagcaggaagatatg
aaaaatgaattacttcaagttgaaacttccaatactgatatagaaacatttccttgccct
gcgtgtggtactgagcaagttaaaactacatcattacttaatcagcatttagatgcttgc
ttgtcttcagataaaacttttcaacaaccagaaataaaaagctcttcaaattttccagaa
acttctaattcaccacgtaatactgctaactcaaacttagcgaattcaaactcttcttcc
aaaatgttagatgatgcttcattctcatgcccaatatgttgcgccagttttcagtcttca
aaaacaacattgtatcagtttaataaccatgttgactcctgcttgagccaatccacaata
agagatattttaaaagaagaaaatggagaatcttttaaaaaacgatcacttgcgaatcat
aataataatgaaaacttatcaaaacgtagaaaattaatttccaaaggcgatggaattgaa
aagttttttgttccactataa

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