Ciona intestinalis (yellow sea squirt): 100179623
Help
Entry
100179623 CDS
T01056
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100179623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
Seryl_tRNA_N
HAUS6_N
FapA
Knl1_RWD_C
Sec10_N
Prominin
CHASE3
Motif
Other DBs
NCBI-GeneID:
100179623
NCBI-ProteinID:
XP_026693566
Ensembl:
ENSCING00000015912
UniProt:
F6YZB7
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MLSTENVSPSLQRSSVFNSWTSKSPIDFSISEPSFNFNGLSHPEVGISDYCKSEHDALRS
HLAEISQTLNNLKNSNDVSPEIRKLEVRLKAIQRMTAQQTDRSLALKKEVGDNDAANKRA
NTDLTQKVEEIAREIAQIKEKQNELERNIESTSGSREQMAPENLSQMVDAFERQLGMYDV
RIADMDQRFQVIETTSYSGVVIWKIRDFSRRKREAVSGRTLSLYSQPFYTSRYGYKMCAR
VYLNGDGMGKGTHMSLFFVVMKGEYDALLPWPFRQKVTLMLLDQGMDRRHLSDTFRPDPT
SSSFKKPTSDMNIASGCPLFVAHNVIEDSSYVKEDTIFLRIHVDTSDLENF
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgctttctaccgagaatgtgtctccatcgcttcagcgatccagcgtctttaattcttgg
acgagcaaatctcccatcgacttttctatatcggagccttcctttaattttaatggactc
agccatccggaagttggaatatcggactactgtaaatccgaacacgatgctctacggtct
cacttggcagaaatttcccaaacgttgaataatttgaaaaactccaatgacgtcagtccc
gagattcgaaagctagaagttaggttaaaagcgattcagagaatgacggctcaacaaacg
gatcgaagtcttgcattgaagaaagaggtgggcgacaatgatgctgctaacaagagagca
aacaccgacttgactcagaaagttgaggaaattgctcgagaaattgctcaaattaaagaa
aaacaaaacgaactggaaaggaatattgaatccacaagtggcagcagagagcaaatggca
ccagaaaatttgtcgcaaatggtggatgcttttgagcgtcagcttggtatgtatgacgtc
agaatcgccgatatggatcagcggtttcaggtcattgaaactacaagttactcaggcgtc
gtcatttggaaaatacgggatttttctcgtcgcaagagggaggcagtgagcggtcgaacg
ttgtctctatacagtcaaccattttacacgagtcgttatggatacaagatgtgcgctcgc
gtttatctcaatggagatggaatgggcaaaggaacacacatgtcgctttttttcgtggtc
atgaaaggagaatacgacgcactgctaccctggccgttcagacagaaggtaacactgatg
ctactggaccaaggaatggaccgacgtcatttgtccgacacattcagaccggatcctacg
tcatcatcgttcaagaaaccaacttccgatatgaacatcgcttctggatgtccattgttc
gtagcccacaacgtcatagaagacagttcttacgtcaaagaagacacaattttcttacgt
attcacgtggatacgtcggacctcgaaaatttttaa
DBGET
integrated database retrieval system
