KEGG   Ciona intestinalis (yellow sea squirt): 100179904
Entry
100179904         CDS       T01056                                 
Name
(RefSeq) DNA polymerase epsilon subunit 4-like
  KO
K03506  DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03030  DNA replication
cin03410  Base excision repair
cin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100179904
   03410 Base excision repair
    100179904
   03420 Nucleotide excision repair
    100179904
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cin03032]
    100179904
   03400 DNA repair and recombination proteins [BR:cin03400]
    100179904
Enzymes [BR:cin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100179904
DNA replication proteins [BR:cin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    100179904
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      100179904
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C DUF7637 TFIID_20kDa
Other DBs
NCBI-GeneID: 100179904
NCBI-ProteinID: XP_002129269
LinkDB
Position
5:2782806..2783905
AA seq 113 aa
MSETQETVGENEAPEQPNLENVSQDPETEKSERATKLPMARIRTLIKVDPHVTIASQESV
FLIAKATELFVDSLAKNMYRITQQQKRKTIQKKDLEAVIEVMDEFAFLDGTTE
NT seq 342 nt   +upstreamnt  +downstreamnt
atgagcgaaacgcaggaaactgttggagaaaatgaagctcccgagcagccgaacttggaa
aatgtctcacaagatcctgagacagagaaatcggagcgagcgacaaagttacccatggcc
agaattcgtactttaattaaggttgatccgcatgttacaattgcgagccaggaatcggtt
ttcttgattgcgaaagcaaccgaactttttgttgacagtcttgcgaaaaacatgtacaga
ataactcaacaacaaaagagaaaaaccattcagaaaaaagaccttgaagctgtcattgag
gttatggatgagttcgcttttcttgatggaacaacagaatga

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