KEGG   Ciona intestinalis (yellow sea squirt): 100180343
Entry
100180343         CDS       T01056                                 
Name
(RefSeq) 3-hydroxyacyl-CoA dehydrogenase type-2-like
  KO
K08683  3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase [EC:1.1.1.35 1.1.1.178]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00280  Valine, leucine and isoleucine degradation
cin01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    100180343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:cin03029]
    100180343
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cin04147]
    100180343
Enzymes [BR:cin01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     100180343
    1.1.1.178  3-hydroxy-2-methylbutyryl-CoA dehydrogenase
     100180343
Mitochondrial biogenesis [BR:cin03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial ribonuclease P
    100180343
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   100180343
SSDB
Motif
Pfam: adh_short adh_short_C2 KR 3Beta_HSD Epimerase NAD_binding_4 GDP_Man_Dehyd
Other DBs
NCBI-GeneID: 100180343
NCBI-ProteinID: XP_002129755
Ensembl: ENSCING00000001978
LinkDB
Position
8:complement(6048885..6050400)
AA seq 260 aa
MVSRAVGGLVSLVTGGASGLGRATVERLVRNGSRVVMFDLPSSDGEKVAKELGENNCVFC
PGDVTSTEDVSAALDVAKSKFGKLDVTVNCAGIGIAVRTYNMHKKKLHPLDQFERVLDVN
VCGTFNVIRLSAQMMNQNDISERQEKGVIINTASVAAYEGQIGQAAYSASKGAIVGMTLP
IARDLSVCSIRVMTIAPGLFETPLLGSLPEKVKNELGKQAPFPQRLGHPDEYAQLVQTII
ENQMLNGEVIRLDGAIRMQP
NT seq 783 nt   +upstreamnt  +downstreamnt
atggttagtcgagctgtaggtggtttagttagtcttgttactggtggtgcatcgggcttg
ggaagagctacagtggaacgattggtcaggaatggtagtcgcgttgttatgttcgatctg
ccgtcatcagatggggaaaaagttgccaaagaacttggcgaaaacaactgcgtgttttgc
ccaggtgatgtaacttcaacagaggatgtttctgctgcgttggatgttgctaagtcaaag
tttggaaaactggatgtaacggttaactgtgctggtattggtattgctgtaaggacatat
aatatgcataagaagaagctacacccgctggaccagtttgaaagagtgttggatgttaat
gtgtgcggaacctttaatgtcattcgcttgtctgcgcaaatgatgaatcagaatgatatt
tccgaaaggcaagaaaaaggcgtgatcattaatacagcaagtgtggcagcatatgagggg
caaatcggtcaagctgcatacagtgcaagcaagggggcaatcgtgggcatgactttacca
attgcacgagatttatctgtgtgttcaatccgtgtcatgacgattgcgccaggattgttc
gagaccccacttttgggatctcttccagaaaaagttaaaaatgagctcggaaaacaagct
ccgttcccacaaagacttggccatccagatgaatatgctcagcttgtgcaaactatcatt
gagaaccaaatgcttaatggagaagttatacgattagatggtgcaattcgcatgcaacca
taa

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